diff --git a/graphify/extract.py b/graphify/extract.py
index 1521fb236..8bbcf7684 100644
--- a/graphify/extract.py
+++ b/graphify/extract.py
@@ -4034,12 +4034,27 @@ def _drop_shadowed_csharp_partial_bases(all_nodes: list[dict], all_edges: list[d
     the halves to agree. Each half's base name is resolved in its own file's
     scope, so a half whose file the resolver cannot see the base from (a
     sibling nested base without `using static` for its holder, say) leaves a
-    placeholder edge while another half binds the real type. After the merge the type then has two same-named bases, and
-    lookups through the base chain bail as ambiguous. The placeholder is the
-    unresolved spelling of the resolved base, so it goes.
+    placeholder edge while another half binds the real type. After the merge
+    the type then has two same-named bases, and lookups through the base chain
+    bail as ambiguous. A placeholder spelled with the bare name is the
+    unresolved spelling of the resolved base, so it goes. One written
+    qualified (`Other.IFoo`) or through a `using` alias of that name can be a
+    different type that only shares the simple name, so it stays.
     """
     nodes_by_id = {str(n.get("id", "")): n for n in all_nodes}
 
+    # `using X = ...;` aliases per file, from the import edges the C# extractor
+    # emits (the same source the C# name resolver reads).
+    aliases_by_file: dict[str, set[str]] = {}
+    for e in all_edges:
+        md = e.get("metadata")
+        if not isinstance(md, dict) or md.get("using_kind") != "alias":
+            continue
+        alias = md.get("alias")
+        src_node = nodes_by_id.get(str(e.get("source", ""))) or {}
+        if isinstance(alias, str) and alias:
+            aliases_by_file.setdefault(str(src_node.get("source_file", "")), set()).add(alias)
+
     def _is_partial_cs(nid: str) -> bool:
         n = nodes_by_id.get(nid) or {}
         return (
@@ -4067,7 +4082,13 @@ def _drop_shadowed_csharp_partial_bases(all_nodes: list[dict], all_edges: list[d
         if not names:
             return False
         tgt = nodes_by_id.get(str(e.get("target", ""))) or {}
-        return not tgt.get("source_file") and str(tgt.get("label", "")) in names
+        label = str(tgt.get("label", ""))
+        if tgt.get("source_file") or label not in names:
+            return False
+        md = e.get("metadata")
+        if isinstance(md, dict) and md.get("qualified"):
+            return False
+        return label not in aliases_by_file.get(str(e.get("source_file", "")), set())
 
     all_edges[:] = [e for e in all_edges if not _shadowed(e)]
 
diff --git a/graphify/extractors/engine.py b/graphify/extractors/engine.py
index 9e31495c6..78d896578 100644
--- a/graphify/extractors/engine.py
+++ b/graphify/extractors/engine.py
@@ -4753,7 +4753,7 @@ def _extract_generic(
     # C# type id -> its name within the namespace, enclosing types first
     # (`` Outer`1.Inner ``). Partial types carry it as `type_path` so the
     # corpus-level partial merge can key nested and generic halves exactly.
-    csharp_type_paths: dict[str, str] = {}
+    csharp_type_paths: dict[str, str | None] = {}
     # #1356: call expressions in property/field initializers (e.g.
     # `let vm = VM()`) live outside function bodies, so the call-walk never
     # reaches them. Collect (owner_nid, call_node) here and walk them too.
@@ -5006,6 +5006,7 @@ def _extract_generic(
                 # enclosing types, so this is what tells two same-named nested
                 # types under different outers apart. None when an enclosing
                 # type's path is unknown.
+                _type_path: str | None
                 if parent_class_nid:
                     _parent_path = csharp_type_paths.get(parent_class_nid)
                     _type_path = (
@@ -5014,8 +5015,18 @@ def _extract_generic(
                     )
                 else:
                     _type_path = class_name_for_id
-                if _type_path is not None:
-                    csharp_type_paths.setdefault(class_nid, _type_path)
+                if class_nid not in csharp_type_paths:
+                    csharp_type_paths[class_nid] = _type_path
+                elif csharp_type_paths[class_nid] != _type_path:
+                    # Two declarations in this file share one id but not one
+                    # path (same-named nested types under different outers).
+                    # No path is right for both, so the node gets none and the
+                    # partial merge leaves it alone.
+                    csharp_type_paths[class_nid] = None
+                    _type_path = None
+                    for _prev in nodes:
+                        if _prev.get("id") == class_nid and isinstance(_prev.get("metadata"), dict):
+                            _prev["metadata"].pop("type_path", None)
                 if parent_class_nid:
                     metadata = {"is_nested_type": True}
                 # #2332: `partial class Foo` split across files mints one node
diff --git a/tests/test_csharp_partial_classes.py b/tests/test_csharp_partial_classes.py
index 8f7be508f..e9369d530 100644
--- a/tests/test_csharp_partial_classes.py
+++ b/tests/test_csharp_partial_classes.py
@@ -556,3 +556,72 @@ def test_schema_bump_retires_csharp_entries_cached_without_type_path(tmp_path, m
     assert len(_nodes_labeled(r, "Inner")) == 1
     boxes = sorted(sorted(_methods_of(r, n["id"])) for n in _nodes_labeled(r, "Box"))
     assert boxes == [[".Plain()"], [".Typed()"]]
+
+
+def test_nested_types_sharing_an_id_in_one_file_are_not_merged(tmp_path):
+    """`OuterA.Inner` and `OuterB.Inner` declared in one file already share
+    one node id. No single type path is right for that node, so it must not
+    join the halves of either `OuterA.Inner` or `OuterB.Inner` elsewhere."""
+    calls, r = _extract(tmp_path, {
+        "One.cs": (
+            "namespace App {\n"
+            "    public partial class OuterA { public partial class Inner { public void A1() {} } }\n"
+            "    public partial class OuterB { public partial class Inner { public void B1() {} } }\n"
+            "}\n"
+        ),
+        "A2.cs": (
+            "namespace App { public partial class OuterA {"
+            " public partial class Inner { public void A2() {} } } }\n"
+        ),
+        "B2.cs": (
+            "namespace App { public partial class OuterB {"
+            " public partial class Inner { public void B2() {} } } }\n"
+        ),
+    })
+    owned = [_methods_of(r, n["id"]) for n in _nodes_labeled(r, "Inner")]
+    assert not any({".A2()", ".B1()"} <= m or {".B2()", ".A1()"} <= m for m in owned), owned
+
+
+def test_qualified_or_aliased_base_is_not_dropped_as_shadowed(tmp_path):
+    """A half that names a same-named but different base (`Other.IFoo`, or an
+    alias) keeps its placeholder edge; only a bare-name placeholder next to
+    the real base of that name is the unresolved spelling of it."""
+    def _bases(case, files):
+        _, r = _extract(tmp_path / case, files)
+        by_id = {n["id"]: n for n in r["nodes"]}
+        return sorted((by_id[e["target"]]["label"], bool(by_id[e["target"]].get("source_file")))
+                      for e in r["edges"] if e["relation"] in ("inherits", "implements"))
+
+    common = {
+        "I.cs": "namespace App { public interface IFoo { void F(); } }\n",
+        "DA.cs": "namespace App { public partial class D : IFoo { public void F() {} } }\n",
+    }
+    qualified = _bases("qualified", {**common, "DB.cs": "namespace App { public partial class D : Other.IFoo { } }\n"})
+    aliased = _bases("aliased", {**common, "DB.cs": (
+        "using IFoo = Other.IFoo;\n"
+        "namespace App { public partial class D : IFoo { } }\n"
+    )})
+    assert qualified == [("IFoo", False), ("IFoo", True)], qualified
+    assert aliased == [("IFoo", False), ("IFoo", True)], aliased
+
+
+def test_receiver_qualified_calls_are_not_rebound_to_the_own_type(tmp_path):
+    """The own-type binding is for unqualified calls only: `base.M()`,
+    `this.M()` and `Type.M()` keep their existing targets."""
+    calls, r = _extract(tmp_path, {
+        "Machine.cs": "namespace App { public class Machine { public virtual void Reset() {} } }\n",
+        "E1.cs": (
+            "namespace App { public partial class Engine : Machine {"
+            " public override void Reset() {} public static void Stop() {} } }\n"
+        ),
+        "E2.cs": (
+            "namespace App { public partial class Engine : Machine {"
+            " public void Go() { base.Reset(); Valve.Stop(); } } }\n"
+        ),
+        "Valve.cs": "namespace App { public static class Valve { public static void Stop() {} } }\n",
+    })
+    go = _find(r, ".Go()", "engine")
+    assert (go, _find(r, ".Reset()", "machine")) in calls
+    assert (go, _find(r, ".Stop()", "valve")) in calls
+    assert (go, _find(r, ".Reset()", "engine")) not in calls
+    assert (go, _find(r, ".Stop()", "engine")) not in calls