diff --git a/README.md b/README.md
index 2f273566a..8c27c82a3 100644
--- a/README.md
+++ b/README.md
@@ -632,7 +632,7 @@ graphify-out/
 /graphify                          # run on current directory
 /graphify ./raw                    # run on a specific folder
 /graphify ./raw --mode deep        # more aggressive relationship extraction
-/graphify ./raw --code-only        # index code only — local AST, no API key (skips docs/PDFs/images)
+graphify extract ./raw --code-only # index code only — local AST, no API key (skips docs/PDFs/images); an `extract` flag, not a skill flag
 /graphify ./raw --update           # re-extract only changed files
 /graphify ./raw --directed         # preserve edge direction
 /graphify ./raw --cluster-only     # rerun clustering on existing graph