44 Commits

Author SHA1 Message Date
Safi 6f9fc65af4 Fix Codex hook JSON schema (#138) and use #!/bin/sh for Windows git hooks (#140)
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-09 14:12:36 +01:00
Safi b101a99d2f Pin tree-sitter>=0.23.0, add version guard, confidence=EXTRACTED for AST calls
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-09 09:36:32 +01:00
Safi 096a76f314 Release v0.3.19
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-09 08:46:26 +01:00
Safi 29c639d97d Apply PRs #82 #93 #102 #109: extension drift, click detection, skill coverage, .graphify_python persistence
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-09 08:22:01 +01:00
Safi dd8235e0b5 v0.3.17: Julia support, smarter chunking, tree-sitter pin, progress output
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-08 22:54:18 +01:00
Safi 23d88c55b0 v0.3.16: NetworkX <3.4 compat, .jsx support, pipx follow-up fix
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-08 22:27:08 +01:00
Safi 0dc125d09a release: 0.3.15 — Trae platform, security hardening, pipx hooks, PowerShell fix 2026-04-08 20:00:05 +01:00
Safi b64c231467 fix: skill-droid.md missing from package-data, louvain kwargs version-safe 2026-04-08 19:47:07 +01:00
Safi 2d64c0cd10 fix: Codex PreToolUse hook + --update ghost node pruning (#86, #51) 2026-04-08 19:29:33 +01:00
Safi bd24ddb1d6 fix: hook JSON format, Go pkg scoping, xcassets PDF, cross-file guard, skill file paths (#83, #85, #52, #81) 2026-04-08 19:20:48 +01:00
Safi 92b70ce5f4 fix: sanitize_label double-encoding and --wiki missing from skill (#66, #55) 2026-04-08 09:40:21 +01:00
Safi 3d53287ff6 Fix Louvain fallback hang on large sparse graphs (#48) 2026-04-07 22:36:45 +01:00
Safi 96ea51c098 Bump version to 0.3.10 2026-04-07 21:20:11 +01:00
Safi a78d25d4fc Add ObjC support, C# inheritance, CLI query, symlink support, bug fixes (v0.3.7-0.3.9)
- Add Objective-C extractor (.m/.mm) with @interface, @implementation, @protocol, imports, calls
- Add C# inheritance extraction via base_list nodes (inherits edges)
- Add --obsidian-dir flag to skill.md and skill-windows.md
- Add graphify query CLI command with --dfs, --budget, --graph flags
- Add follow_symlinks parameter to detect() and collect_files() with cycle detection
- Fix semantic cache relative path resolution (was saving only 4/17 files)
- Fix validate.py missing rationale file_type causing 75 warnings per run
- Add tree-sitter-objc dependency
- Update README with .m/.mm extensions, --obsidian-dir usage, Codex $ skill trigger
- 367 tests passing

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-07 20:20:49 +01:00
Safi 3d5da6039a Add Elixir language support (.ex/.exs)
Extracts defmodule, def/defp, alias/import/require/use, and call graph.
Follows same custom-walk pattern as Zig and PowerShell extractors.
2026-04-07 12:54:12 +01:00
Safi f6dd049cb0 Add .docx and .xlsx support via optional [office] extra
python-docx converts .docx to markdown (headings, lists, tables).
openpyxl converts .xlsx sheets to markdown tables. Both are
pre-converted to .md sidecars in graphify-out/converted/ before
semantic extraction - no skill changes needed. Graceful fallback
if [office] not installed: file is skipped with an install hint.
2026-04-07 12:38:03 +01:00
Safi a06313a0f9 Fix UnicodeDecodeError on Windows GBK locale: add encoding=utf-8 to all read_text/write_text calls 2026-04-07 11:54:54 +01:00
Safi db2d297296 Add Windows support: skill-windows.md with PowerShell-compatible commands
graphify install now auto-detects Windows and installs the Windows skill
variant. skill-windows.md replaces bash-specific commands (which, head, tr,
rm -f, mkdir -p) with PowerShell equivalents. Bumps to v0.3.3.
2026-04-07 11:30:08 +01:00
Safi d7230a24c3 bump version to 0.3.2 2026-04-07 09:59:01 +01:00
Safi 9d998cc810 Add Zig and PowerShell language support 2026-04-07 09:56:53 +01:00
Safi e7bd4f38ee bump version to 0.3.1 2026-04-06 22:24:21 +01:00
Safi 9eda1558c2 feat: Lua language support 2026-04-06 21:59:38 +01:00
Safi 477465ae0d feat: Swift language support
* feat: add Swift language support

Add tree-sitter-swift extractor for classes, structs, protocols,
functions, imports, and call graph edges. Includes 8 passing tests.

* feat: full Swift AST support — enums, extensions, actors, conformance

- Enums: extract enum types, methods, and cases (case_of edges)
- Extensions: methods attach to the original type (no duplicate nodes)
- Actors: recognized via unified class_declaration node type
- Conformance/inheritance: inherits edges from : Protocol syntax
- deinit/subscript: name resolution for nameless declarations
- 12 new tests (110 total, all passing)
2026-04-06 21:59:38 +01:00
Safi aed4a981a1 v3: MIT license, multi-platform packaging and CI 2026-04-06 16:06:31 +01:00
Safi 38d967fc63 feat: multi-platform skill files and install routing (Codex, OpenCode, OpenClaw) 2026-04-06 16:06:31 +01:00
Safi 07de9d5c22 fix: use correct Python interpreter for pipx installs 2026-04-06 16:06:31 +01:00
Safi c1bf6c90dc fix graspologic optional, fall back to networkx louvain, add privacy section 2026-04-06 16:06:31 +01:00
Safi 4ba8198c7c v2.1: PyPI release and CI for v2 branch 2026-04-06 16:06:31 +01:00
Safi 0ee77c0b6a bump version to 0.2.0 2026-04-06 16:06:31 +01:00
Safi 3a117c93e8 v2: hypergraph support - hyperedges in graph.json, shaded regions in HTML, report section 2026-04-06 16:06:31 +01:00
Safi 6fa4c7e662 v2: semantic similarity edges, scored higher in surprising connections 2026-04-06 16:06:31 +01:00
Safi dafe6c9f03 v2: confidence scores on INFERRED edges, avg shown in report 2026-04-06 16:06:31 +01:00
Safi 7e3da961a9 v2: fast --update for code-only changes, parallel AST+semantic, graphify claude install 2026-04-06 16:06:31 +01:00
Safi 66f1f40de8 add git commit hook - auto-rebuilds graph after every commit 2026-04-06 16:06:31 +01:00
Safi e2fd4f944e watch: auto-rebuild graph on code changes without LLM, notify on doc/image changes 2026-04-06 16:06:31 +01:00
Safi d213c03adf Add --wiki export: agent-crawlable knowledge wiki from graph 2026-04-06 16:06:31 +01:00
Safi 92ab83ea38 Use graph.json for follow-up questions; bump to 0.1.6 2026-04-06 16:06:31 +01:00
Safi 010583674e release: 0.1.5 2026-04-06 16:06:31 +01:00
Safi d4b24d8609 feat: vis.js HTML graph, token reduction benchmark, repo cleanup
- Replace pyvis with custom vis.js renderer: node size by degree,
  click-to-inspect panel with clickable neighbors, search box,
  community filter, physics clustering by community
- HTML graph generated by default on every run (no --html flag needed)
- Token reduction benchmark auto-runs after every /graphify on corpora >5k words
- Fix 292 edge warnings: silently skip stdlib/external edges in build.py
- Fix build() to merge extractions before building (cross-extraction edges were dropped)
- Add 5 HTML renderer tests (223 total)
- Remove unnecessary files: lib/, tests/eval_attention.py, misplaced eval reports
- Add graphify-out/ and .graphify_*.json to .gitignore
- Bump version to 0.1.4, remove pyvis dependency
- README: token reduction as top-level selling point, vis.js in tech stack,
  graph.html in output listing, correct test count and install command
2026-04-06 16:06:31 +01:00
Safi 5db8f7ce39 docs: update surprising connections description, test count
style: replace all em dashes with hyphens

fix: explain hidden .graphify/ folder in skill output and README

fix: rename .graphify/ to graphify-out/ so output is visible by default
2026-04-06 16:06:31 +01:00
Safi 64e07abd98 docs: CI, architecture guide, worked examples, README fixes
- Add GitHub Actions CI workflow (Python 3.10 and 3.12)
- Add CI badge to README
- Add ARCHITECTURE.md: pipeline overview, module table, schema, how to
  add a language extractor, security summary
- Move eval reports from tests/ to worked/httpx/ and worked/mixed-corpus/
- Fix README: test count 163→212, language table (13 languages via
  tree-sitter), extract.py description, worked examples links

benchmark: 8.8x token reduction on nanoGPT + minGPT + micrograd

- Run AST extraction on 29 Python files across 3 Karpathy repos
- 177 nodes, 246 edges, 17 communities (Leiden)
- 8.8x avg token reduction vs naive full-corpus context stuffing
- Notable: micrograd cleanly splits into engine/nn communities;
  nanoGPT model vs training loop correctly separated
- Honest: stdlib import noise flagged, config isolates documented

benchmark: 71.5x token reduction on mixed corpus (code+papers+images)

Full run: nanoGPT+minGPT+micrograd + 5 research papers + 4 images
285 nodes, 340 edges, 53 communities
Average BFS query: 1,726 tokens vs 123,488 naive (71.5x)
Code-only (AST) sub-benchmark: 8.8x on 13k-word corpus
2026-04-06 16:06:31 +01:00
Safi 81a43f028f feat: 13-language AST support and token benchmark
Java, C, C++, Ruby, C#, Kotlin, Scala, PHP via tree-sitter (13 total)
benchmark.py measures BFS subgraph tokens vs corpus tokens
5 skill bug fixes (cohesion crash, dead step, missing MCP tool)
2026-04-04 18:56:38 +01:00
Safi 0b7460a9e3 perf+fix: parallel extraction, faster imports, bug fixes
45x faster cluster import, 135x faster detect, parallel subagent extraction,
auto-exclude venvs/caches, suggest_questions fix, manifest fix, install CLI
2026-04-04 18:56:38 +01:00
Safi ce47198be1 feat: Claude Code skill, Obsidian vault, install, tests
skill.md with full pipeline steps, Obsidian as default output (canvas, tags,
dataview, graph colors), two-command install, 71 tests, .gitignore, deps
2026-04-04 18:53:43 +01:00