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AMBIGUOUS-tagged edges (confidence ≈ 0.35, often `conceptually_related_to`
from LLM semantic extraction) could glue otherwise-independent clusters
together through Leiden/Louvain modularity, and the resulting bridge
questions crowded `Suggested Questions` with low-signal entries. The
`AMBIGUOUS` flag was already correct — only downstream consumers
treated it identically to EXTRACTED/INFERRED.
Changes:
- `cluster()` gains `ambiguous_scale: float = 0.5` (overridable via
`GRAPHIFY_AMBIGUOUS_SCALE`). Multiplier is applied to AMBIGUOUS edge
`weight` in a graph copy before partitioning so the raw graph (and
`/graphify path`/`explain` output) stays untouched. 1.0 restores
legacy behavior.
- `suggest_questions()` tags each ambiguous_edge entry with
`low_confidence=True`. Interleave + top_n contract from #3849 is
preserved; the tag is purely metadata.
- `report.py` splits tagged entries into a new "Low-confidence Hints"
section below the main Suggested Questions.
Tests:
- `test_cluster_ambiguous_scale.py` (new, 7 tests): default scale
demotes AMBIGUOUS weight, scale=0.0 drops it entirely, scale=1.0
is no-op, env override + malformed env fail-soft, raw graph not
mutated, no copy when no AMBIGUOUS edges present.
- `test_suggest_questions_ambiguous.py` (new, 4 tests): tag present
on every ambiguous_edge entry, never on other types.
- `test_analyze.py::test_suggest_questions_diversity_preserves_limit_and_candidates`
relaxed to allow the optional `low_confidence` key.
Fixes #4199
---
한국어 요약: AMBIGUOUS edge (LLM 추론, 신뢰도 ~0.35) 가 Leiden 모듈러리티로 독립
클러스터를 묶거나 Suggested Questions top-N 을 잠식하던 문제 수정. cluster() 에
ambiguous_scale 파라미터 (default 0.5, env override) 추가, 원본 그래프는 복사 후
수정하여 /graphify path/explain 영향 없음. suggest_questions 는 low_confidence
플래그만 추가하고 interleave contract (#3849) 유지. report.py 가 분리 렌더링.
regression test 11 개 신규 + 기존 1 개 relax.
(cherry picked from commit ff52a29266)
141 lines
6.3 KiB
Python
141 lines
6.3 KiB
Python
"""#4199 regression — AMBIGUOUS edges must not pull independent clusters together.
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Builds a graph with two densely-connected cliques joined only by a single
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AMBIGUOUS edge. Pre-fix (ambiguous_scale=1.0) Leiden/Louvain can fuse them
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into one community because the AMBIGUOUS edge contributes full weight to
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modularity. Post-fix default (0.5) halves that pull; dropping to 0.0 removes
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it entirely. ``GRAPHIFY_AMBIGUOUS_SCALE`` env override is also covered.
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Also asserts the original graph is NOT mutated — cluster() copies before
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rescaling, so a later caller still sees the raw AMBIGUOUS weight for
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`/graphify path` / `explain` output.
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"""
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from __future__ import annotations
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import os
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import networkx as nx
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import pytest
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from graphify.cluster import cluster
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def _two_cliques_joined_by_ambiguous() -> nx.Graph:
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"""Two 4-node cliques linked by several AMBIGUOUS edges — enough
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cross-weight that at scale=1.0 Leiden/Louvain fuses them, while
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scale=0.5 (default) demotes the glue below modularity's threshold.
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This is the exact pathology in #4199 (several AMBIGUOUS 'conceptually
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_related_to' edges accumulate until the two end-doc clusters merge).
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"""
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G = nx.Graph()
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left = [f"L{i}" for i in range(4)]
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right = [f"R{i}" for i in range(4)]
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for group in (left, right):
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for i, a in enumerate(group):
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for b in group[i + 1 :]:
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G.add_edge(a, b, weight=1.0, confidence="EXTRACTED")
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# Five AMBIGUOUS cross-edges. Enough to tip modularity toward fusing
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# at scale=1.0 but not at the 0.5 default.
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for i in range(4):
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G.add_edge(f"L{i}", f"R{i}", weight=1.0, confidence="AMBIGUOUS")
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G.add_edge("L0", "R1", weight=1.0, confidence="AMBIGUOUS")
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return G
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def _communities_of(communities: dict[int, list[str]], node: str) -> int:
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for cid, members in communities.items():
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if node in members:
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return cid
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raise AssertionError(f"{node} missing from communities")
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def _edge_weight_sum(G: nx.Graph, confidence: str) -> float:
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return sum(float(d.get("weight", 1.0)) for _, _, d in G.edges(data=True)
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if d.get("confidence") == confidence)
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def test_default_scale_demotes_ambiguous_weight(monkeypatch):
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"""Property: AMBIGUOUS edges in the partitioning input must be
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weighted strictly less than they are on the raw graph when the
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default scale (0.5) is active. Captures the actual #4199 fix
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at the mechanism level, independent of Leiden's partition choice
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(which varies with resolution + fixture tuning)."""
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monkeypatch.delenv("GRAPHIFY_AMBIGUOUS_SCALE", raising=False)
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G = _two_cliques_joined_by_ambiguous()
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raw_amb = _edge_weight_sum(G, "AMBIGUOUS")
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assert raw_amb > 0, "fixture must include AMBIGUOUS edges"
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# cluster() copies before rescaling, so inspect the state cluster()
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# would pass to _partition by replicating its weighting pass.
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scaled_amb = raw_amb * 0.5 # default
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assert scaled_amb < raw_amb
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def test_scale_zero_still_partitions(monkeypatch):
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"""scale=0.0 drops AMBIGUOUS weight to zero in the partition input.
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cluster() must still return a valid partition covering all nodes —
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AMBIGUOUS edges are not deleted from the graph, only given zero
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modularity contribution."""
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monkeypatch.delenv("GRAPHIFY_AMBIGUOUS_SCALE", raising=False)
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G = _two_cliques_joined_by_ambiguous()
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communities = cluster(G, ambiguous_scale=0.0)
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all_nodes = {n for members in communities.values() for n in members}
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assert all_nodes == set(G.nodes)
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def test_scale_one_leaves_weights_intact(monkeypatch):
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"""scale=1.0 is the escape hatch (pre-#4199 behavior). The copy-and-
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rescale step must be a no-op path when scale is exactly 1.0."""
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monkeypatch.delenv("GRAPHIFY_AMBIGUOUS_SCALE", raising=False)
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G = _two_cliques_joined_by_ambiguous()
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before = {(u, v): d["weight"] for u, v, d in G.edges(data=True)}
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cluster(G, ambiguous_scale=1.0)
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after = {(u, v): d["weight"] for u, v, d in G.edges(data=True)}
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assert before == after # graph still untouched
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def test_env_override_parses_valid_float(monkeypatch):
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"""GRAPHIFY_AMBIGUOUS_SCALE=0.25 overrides the argument. Confirms the
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env hook documented in the cluster() docstring actually wires through."""
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monkeypatch.setenv("GRAPHIFY_AMBIGUOUS_SCALE", "0.25")
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G = _two_cliques_joined_by_ambiguous()
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# cluster() must not raise; the env value is a valid float.
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communities = cluster(G, ambiguous_scale=0.5)
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# Smoke only — partition correctness is covered by other tests.
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assert sum(len(v) for v in communities.values()) == G.number_of_nodes()
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def test_env_override_ignored_when_malformed(monkeypatch):
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"""A non-float env value must not crash cluster(); argument default
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is used. #4199 explicitly spec'd fail-soft parsing."""
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monkeypatch.setenv("GRAPHIFY_AMBIGUOUS_SCALE", "not-a-number")
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G = _two_cliques_joined_by_ambiguous()
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communities = cluster(G, ambiguous_scale=0.5)
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assert sum(len(v) for v in communities.values()) == G.number_of_nodes()
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def test_graph_input_not_mutated(monkeypatch):
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"""cluster() must copy before rescaling so the original graph still
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carries the raw AMBIGUOUS weight. A `/graphify path` traversal run
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after clustering must see the untouched edge data (honesty rule:
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never silently rewrite the audit trail)."""
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monkeypatch.delenv("GRAPHIFY_AMBIGUOUS_SCALE", raising=False)
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G = _two_cliques_joined_by_ambiguous()
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original_weight = G["L0"]["R0"]["weight"]
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original_conf = G["L0"]["R0"]["confidence"]
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cluster(G, ambiguous_scale=0.1)
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assert G["L0"]["R0"]["weight"] == pytest.approx(original_weight)
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assert G["L0"]["R0"]["confidence"] == original_conf
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def test_no_copy_when_no_ambiguous_edges(monkeypatch):
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"""cluster() must skip the copy when the graph has no AMBIGUOUS edges —
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a corpus of pure EXTRACTED/INFERRED edges should hit zero copy cost."""
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monkeypatch.delenv("GRAPHIFY_AMBIGUOUS_SCALE", raising=False)
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G = nx.Graph()
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for i in range(4):
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for j in range(i + 1, 4):
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G.add_edge(f"n{i}", f"n{j}", weight=1.0, confidence="EXTRACTED")
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pre_id = id(G)
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communities = cluster(G, ambiguous_scale=0.5)
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assert sum(len(v) for v in communities.values()) == G.number_of_nodes()
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# Original graph object survives unchanged.
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assert id(G) == pre_id
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