mirror of
https://github.com/safishamsi/graphify.git
synced 2026-10-14 07:59:40 +00:00
global add loaded graph.json with a plain undirected node_link_graph, so
every link whose target precedes its source in the node list was written
to ~/.graphify/global-graph.json reversed. Stamp _src/_tgt with
restore_arc_direction before the load, as the export loader and
load_node_link_graph do since #4088.
The external-node dedup rewired edge endpoints but not the markers, so a
deduplicated repo's markers named a node that no longer exists. Remap
_src/_tgt along with the endpoints.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
(cherry picked from commit 477848390e)
238 lines
10 KiB
Python
238 lines
10 KiB
Python
"""Reloading graph.json must keep each edge's stored direction (#4066).
|
|
|
|
graph.json is written ``directed: false`` and carries true direction in each
|
|
link's arc order (#563), or in ``_src``/``_tgt`` markers on legacy
|
|
canonicalized files (#2309). A plain undirected ``node_link_graph`` load
|
|
re-orders each edge's endpoints by node-list position, so a link whose target
|
|
node precedes its source node comes back reversed.
|
|
|
|
query/path/explain (#2309, #2487), affected (#1174), merge-graphs (#2261) and
|
|
the MCP server already restore direction. These tests cover the remaining
|
|
reloaders: the export subcommands, the watch/update HTML re-render, the git
|
|
merge driver, which writes the committed graph.json, and `global add`, which
|
|
writes ~/.graphify/global-graph.json.
|
|
"""
|
|
from __future__ import annotations
|
|
|
|
import json
|
|
import os
|
|
import re
|
|
import subprocess
|
|
import sys
|
|
from pathlib import Path
|
|
from unittest.mock import patch
|
|
|
|
PYTHON = sys.executable
|
|
# A fixed positive limit, so HTML rendering never depends on the caller's
|
|
# shell (GRAPHIFY_VIZ_NODE_LIMIT=0 disables it, e.g. on CI runners).
|
|
_VIZ_ENV = {"GRAPHIFY_VIZ_NODE_LIMIT": "5000"}
|
|
|
|
|
|
def _graph_json(tmp_path: Path) -> Path:
|
|
"""The `graphify extract` shape: undirected flag, direction in arc order.
|
|
|
|
``callee`` precedes ``caller`` in the node list, the exact condition under
|
|
which an undirected load flips the edge. ``helper`` -> ``util`` is listed
|
|
source-first, so it survives either way and guards against over-correction.
|
|
"""
|
|
out = tmp_path / "graphify-out"
|
|
out.mkdir()
|
|
data = {
|
|
"directed": False,
|
|
"multigraph": False,
|
|
"graph": {},
|
|
"nodes": [
|
|
{"id": "callee", "label": "callee()", "file_type": "code", "source_file": "a.py", "community": 0},
|
|
{"id": "caller", "label": "caller()", "file_type": "code", "source_file": "a.py", "community": 0},
|
|
{"id": "helper", "label": "helper()", "file_type": "code", "source_file": "a.py", "community": 0},
|
|
{"id": "util", "label": "util()", "file_type": "code", "source_file": "a.py", "community": 0},
|
|
# legacy canonicalized link: arc flipped, markers carry the truth
|
|
{"id": "legacy_b", "label": "legacy_b()", "file_type": "code", "source_file": "a.py", "community": 0},
|
|
{"id": "legacy_a", "label": "legacy_a()", "file_type": "code", "source_file": "a.py", "community": 0},
|
|
],
|
|
"links": [
|
|
{"source": "caller", "target": "callee", "relation": "calls", "confidence": "EXTRACTED"},
|
|
{"source": "helper", "target": "util", "relation": "calls", "confidence": "EXTRACTED"},
|
|
{"source": "legacy_b", "target": "legacy_a", "_src": "legacy_a", "_tgt": "legacy_b",
|
|
"relation": "calls", "confidence": "EXTRACTED"},
|
|
],
|
|
}
|
|
p = out / "graph.json"
|
|
p.write_text(json.dumps(data))
|
|
(out / ".graphify_analysis.json").write_text(json.dumps(
|
|
{"communities": {"0": ["callee", "caller", "helper", "util", "legacy_a", "legacy_b"]}}))
|
|
return p
|
|
|
|
|
|
TRUE_ARCS = {("caller", "callee"), ("helper", "util"), ("legacy_a", "legacy_b")}
|
|
|
|
|
|
def _run(args: list[str], cwd: Path, env: dict[str, str] | None = None) -> subprocess.CompletedProcess:
|
|
env = dict(env if env is not None else os.environ, GRAPHIFY_NO_AUTO_REFRESH="1", **_VIZ_ENV)
|
|
return subprocess.run([PYTHON, "-m", "graphify", *args], cwd=cwd,
|
|
capture_output=True, text=True, env=env)
|
|
|
|
|
|
def _html_arcs(html_path: Path) -> set[tuple[str, str]]:
|
|
html = html_path.read_text(encoding="utf-8")
|
|
return set(re.findall(r'"from": "([^"]+)", "to": "([^"]+)"', html))
|
|
|
|
|
|
def test_load_node_link_graph_stamps_stored_direction(tmp_path):
|
|
from graphify.paths import load_node_link_graph
|
|
|
|
G = load_node_link_graph(_graph_json(tmp_path))
|
|
arcs = {(d.get("_src", u), d.get("_tgt", v)) for u, v, d in G.edges(data=True)}
|
|
assert arcs == TRUE_ARCS
|
|
|
|
|
|
def test_export_html_draws_arrows_in_stored_direction(tmp_path):
|
|
_graph_json(tmp_path)
|
|
r = _run(["export", "html"], tmp_path)
|
|
assert r.returncode == 0, r.stderr
|
|
assert _html_arcs(tmp_path / "graphify-out" / "graph.html") == TRUE_ARCS
|
|
|
|
|
|
def test_export_cypher_merges_edges_in_stored_direction(tmp_path):
|
|
_graph_json(tmp_path)
|
|
r = _run(["export", "neo4j"], tmp_path)
|
|
assert r.returncode == 0, r.stderr
|
|
cypher = (tmp_path / "graphify-out" / "cypher.txt").read_text(encoding="utf-8")
|
|
arcs = set(re.findall(r"MATCH \(a \{id: '([^']+)'\}\), \(b \{id: '([^']+)'\}\)", cypher))
|
|
assert arcs == TRUE_ARCS
|
|
|
|
|
|
# Fake SDKs, imported by the subprocess through PYTHONPATH, that log the
|
|
# (src, tgt) of every relationship MERGE instead of talking to a database.
|
|
_FAKE_NEO4J = '''
|
|
import json, os
|
|
class _S:
|
|
def __enter__(self): return self
|
|
def __exit__(self, *a): return False
|
|
def run(self, q, **p):
|
|
if "src" in p:
|
|
with open(os.environ["FAKE_ARC_LOG"], "a") as f:
|
|
f.write(json.dumps([p["src"], p["tgt"]]) + "\\n")
|
|
class _D:
|
|
def session(self, **k): return _S()
|
|
def close(self): pass
|
|
class GraphDatabase:
|
|
@staticmethod
|
|
def driver(*a, **k): return _D()
|
|
'''
|
|
|
|
_FAKE_FALKORDB = '''
|
|
import json, os
|
|
class _G:
|
|
def query(self, q, params=None):
|
|
if params and "src" in params:
|
|
with open(os.environ["FAKE_ARC_LOG"], "a") as f:
|
|
f.write(json.dumps([params["src"], params["tgt"]]) + "\\n")
|
|
class FalkorDB:
|
|
def __init__(self, *a, **k): pass
|
|
def select_graph(self, name): return _G()
|
|
'''
|
|
|
|
|
|
def _push_arcs(tmp_path: Path, backend: str) -> set[tuple[str, str]]:
|
|
fakes = tmp_path / "fakes"
|
|
(fakes / backend).mkdir(parents=True)
|
|
(fakes / backend / "__init__.py").write_text(
|
|
_FAKE_NEO4J if backend == "neo4j" else _FAKE_FALKORDB)
|
|
log = tmp_path / "arcs.log"
|
|
env = {k: v for k, v in os.environ.items() if k not in ("NEO4J_PASSWORD", "FALKORDB_PASSWORD")}
|
|
env["PYTHONPATH"] = os.pathsep.join([str(fakes), env.get("PYTHONPATH", "")])
|
|
env["FAKE_ARC_LOG"] = str(log)
|
|
r = _run(["export", backend, "--push", "bolt://localhost:7687", "--password", "x"], tmp_path, env)
|
|
assert r.returncode == 0, r.stderr
|
|
return {tuple(json.loads(line)) for line in log.read_text().splitlines()}
|
|
|
|
|
|
def test_export_neo4j_push_sends_stored_direction(tmp_path):
|
|
_graph_json(tmp_path)
|
|
assert _push_arcs(tmp_path, "neo4j") == TRUE_ARCS
|
|
|
|
|
|
def test_export_falkordb_push_sends_stored_direction(tmp_path):
|
|
_graph_json(tmp_path)
|
|
assert _push_arcs(tmp_path, "falkordb") == TRUE_ARCS
|
|
|
|
|
|
def test_export_obsidian_canvas_edges_in_stored_direction(tmp_path):
|
|
"""JSON Canvas draws the arrowhead at ``toNode`` by default."""
|
|
_graph_json(tmp_path)
|
|
r = _run(["export", "obsidian"], tmp_path)
|
|
assert r.returncode == 0, r.stderr
|
|
canvas = json.loads((tmp_path / "graphify-out" / "obsidian" / "graph.canvas").read_text())
|
|
arcs = {(e["fromNode"][2:], e["toNode"][2:]) for e in canvas["edges"]}
|
|
assert arcs == TRUE_ARCS
|
|
|
|
|
|
def test_watch_html_reconcile_draws_stored_direction(tmp_path, monkeypatch):
|
|
"""`graphify update`, `watch` and the git hooks re-render graph.html here."""
|
|
from graphify.watch import _reconcile_graph_html
|
|
|
|
for key, value in _VIZ_ENV.items():
|
|
monkeypatch.setenv(key, value)
|
|
gp = _graph_json(tmp_path)
|
|
assert _reconcile_graph_html(gp.parent, json.loads(gp.read_text())) == "rendered"
|
|
assert _html_arcs(gp.parent / "graph.html") == TRUE_ARCS
|
|
|
|
|
|
def test_merge_driver_keeps_stored_direction_in_arc_order(tmp_path):
|
|
"""Even a merge of three identical copies used to rewrite graph.json reversed."""
|
|
gp = _graph_json(tmp_path)
|
|
base, cur, oth = (tmp_path / n for n in ("base.json", "cur.json", "oth.json"))
|
|
for p in (base, cur, oth):
|
|
p.write_text(gp.read_text())
|
|
r = _run(["merge-driver", str(base), str(cur), str(oth)], tmp_path)
|
|
assert r.returncode == 0, r.stderr
|
|
merged = json.loads(cur.read_text())
|
|
# Arc order is the direction (what to_json writes); no markers left behind.
|
|
assert {(l["source"], l["target"]) for l in merged["links"]} == TRUE_ARCS
|
|
assert not any("_src" in l or "_tgt" in l for l in merged["links"])
|
|
|
|
|
|
def _global_add(tmp_path: Path, *repos: tuple[Path, str]) -> dict:
|
|
"""Run `global add` for each (graph.json, tag) and return the saved global graph."""
|
|
from graphify.global_graph import global_add
|
|
|
|
gdir = tmp_path / ".graphify"
|
|
with patch("graphify.global_graph._GLOBAL_DIR", gdir), \
|
|
patch("graphify.global_graph._GLOBAL_GRAPH", gdir / "global-graph.json"), \
|
|
patch("graphify.global_graph._GLOBAL_MANIFEST", gdir / "global-manifest.json"):
|
|
for graph_path, tag in repos:
|
|
global_add(graph_path, tag)
|
|
return json.loads((gdir / "global-graph.json").read_text())
|
|
|
|
|
|
def _marker_arcs(data: dict) -> set[tuple[str, str]]:
|
|
return {(l.get("_src", l["source"]), l.get("_tgt", l["target"])) for l in data["links"]}
|
|
|
|
|
|
def test_global_add_persists_stored_direction(tmp_path):
|
|
saved = _global_add(tmp_path, (_graph_json(tmp_path), "proj"))
|
|
assert _marker_arcs(saved) == {(f"proj::{s}", f"proj::{t}") for s, t in TRUE_ARCS}
|
|
|
|
|
|
def test_global_add_dedup_remaps_direction_markers(tmp_path):
|
|
"""Two repos share an external `requests` node. B's copy is deduplicated
|
|
onto A::requests, so the markers on B's edge must follow it there."""
|
|
|
|
def repo(name: str, fn: str) -> Path:
|
|
# The external node is listed first, the order an undirected load flips.
|
|
data = {"directed": False, "multigraph": False, "graph": {},
|
|
"nodes": [{"id": "requests", "label": "requests"},
|
|
{"id": fn, "label": f"{fn}()", "source_file": f"{name}/x.py"}],
|
|
"links": [{"source": fn, "target": "requests", "relation": "calls"}]}
|
|
p = tmp_path / name / "graph.json"
|
|
p.parent.mkdir()
|
|
p.write_text(json.dumps(data))
|
|
return p
|
|
|
|
saved = _global_add(tmp_path, (repo("A", "fa"), "A"), (repo("B", "fb"), "B"))
|
|
arcs = _marker_arcs(saved)
|
|
assert arcs == {("A::fa", "A::requests"), ("B::fb", "A::requests")}
|
|
ids = {n["id"] for n in saved["nodes"]}
|
|
assert all(end in ids for arc in arcs for end in arc)
|