Safi fa70449d80 Suppress autogenerated module docstrings from rationale extraction (#882) ...

Alembic/Flask-Migrate revisions, Django migrations, and protobuf/OpenAPI
generated files produce hundreds of degree-1 rationale nodes labeled as
'possible documentation gaps'. Their module docstrings are revision
annotations or boilerplate, not architectural rationale.

- Add _is_autogenerated_python() in extract.py detecting Alembic, Django
  migrations, and generic DO-NOT-EDIT markers; skip module docstring only
- Function/class docstrings inside those files still extracted as normal
- report.py: exclude file_type=rationale nodes from isolated-node gaps
  section — rationale nodes are degree-1 by construction; flagging them
  as missing edges was always wrong
- 5 new tests covering Alembic, Django, protobuf, false-positive guard,
  and function-docstring passthrough

2026-05-16 00:01:57 +01:00

..

fixtures

Add tree-sitter bash and JSON extractors (#866)

2026-05-15 00:07:09 +01:00

__init__.py

…

bench_extract.py

…

test_analyze.py

…

test_astro_extraction.py

feat(extract): add .astro support (#850)

2026-05-13 10:07:50 -07:00

test_benchmark.py

fix(windows): unblock pipeline on Windows consoles + missing __main__ guards (#788)

2026-05-09 12:59:38 +01:00

test_build.py

fix --update manifest shrink and align file_type enum (#837, #840)

2026-05-13 23:22:37 +01:00

test_cache.py

…

test_callflow_html.py

feat: add callflow HTML export with Mermaid architecture diagrams

2026-05-09 23:26:01 +01:00

test_chunking.py

…

test_claude_cli_backend.py

feat: add --backend claude-cli (routes through Claude Code, no API key needed) (#855)

2026-05-13 23:53:00 +01:00

test_claude_md.py

…

test_cli_export.py

fix watch.py labels churn, edges/links schema, shrink-check duplication, and skill.md ID edge cases

2026-05-14 00:29:54 +01:00

test_cluster.py

reduce graph update churn and stabilize community IDs

2026-05-12 02:23:51 +03:00

test_confidence.py

…

test_dedup.py

fix gitignore parent-exclusion rule (#882) and dedup false merges on short labels (#878)

2026-05-15 22:57:36 +01:00

test_detect.py

fix gitignore parent-exclusion rule (#882) and dedup false merges on short labels (#878)

2026-05-15 22:57:36 +01:00

test_explain_cli.py

fix path/explain arrow direction and bedrock CLI guard (#846, #849, #853)

2026-05-13 23:19:15 +01:00

test_export.py

…

test_extract.py

Add tree-sitter bash and JSON extractors (#866)

2026-05-15 00:07:09 +01:00

test_global_graph.py

add Ollama backend and cross-project global graph (#729)

2026-05-05 18:36:59 +01:00

test_google_workspace.py

Harden Google Workspace gws exports (#772)

2026-05-07 20:07:57 +01:00

test_hooks.py

fix #651: hook-check exits silently instead of emitting unsupported additionalContext

2026-05-02 17:29:40 +01:00

test_hypergraph.py

…

test_import_extension_resolution.py

fix(extract): apply resolver fixups to JS/TS dynamic_import handler

2026-05-05 00:07:50 +02:00

test_incremental.py

Add incremental updates to graphify extract: semantic cache + build_merge + manifest

2026-05-04 18:07:02 +01:00

test_ingest.py

…

test_install.py

Handle positional install platforms

2026-05-06 17:10:45 -04:00

test_languages.py

rename sample.F90 → sample_preprocessed.F90 to fix macOS case-collision

2026-05-13 23:39:01 +01:00

test_llm_backends.py

fix Ollama num_ctx: derive from actual chunk size instead of hardcoding 131072 (#798)

2026-05-09 23:42:44 +01:00

test_multilang.py

fix(extract): add ALTER TABLE FK extraction + schema-qualified name support for SQL (#779)

2026-05-08 20:31:25 +01:00

test_ollama.py

security hardening: F-002/F-005/F-007/F-008/F-009/F-010/F-016/F-031/F-035/F-038/PR747-NEW-2

2026-05-07 16:32:26 +01:00

test_pascal.py

add Pascal regex fallback - extraction works without tree-sitter-pascal

2026-05-09 15:52:17 +01:00

test_path_cli.py

fix path/explain arrow direction and bedrock CLI guard (#846, #849, #853)

2026-05-13 23:19:15 +01:00

test_pipeline.py

…

test_query_cli.py

…

test_rationale.py

Suppress autogenerated module docstrings from rationale extraction (#882)

2026-05-16 00:01:57 +01:00

test_report.py

Fix #664: filter thin communities from GRAPH_REPORT.md by default

2026-05-02 18:09:32 +01:00

test_security.py

…

test_semantic_similarity.py

…

test_serve.py

fix #873 index dot dirs, fix #874 MCP hot-reload on graph change

2026-05-15 08:51:46 +01:00

test_transcribe.py

…

test_validate.py

…

test_watch.py

Fix detect.py missing .sh/.json extensions and security harden extractors

2026-05-15 00:18:33 +01:00

test_wiki.py

…