Mamadou Bah e7ba16bfa3 skill: add Step 4.5 graph-health gate + anchor caches on the scan root ...

Two integrity improvements to the core skill runbook (rendered via skillgen):

1. Graph-health gate (new Step 4.5): runs diagnostics.diagnose_extraction
   read-only after build, before labeling, and surfaces dangling/missing/
   self-loop and same-endpoint-collapsed edges — the silent-corruption modes of
   incremental updates and AST/LLM id mismatches. Never aborts.
2. Anchor the AST and semantic caches on the scan root (root/cache_root=
   'INPUT_PATH') instead of the cwd, matching the CLI extract path
   (ast cache_root=out_root, check/save_semantic_cache(root=out_root)) and
   build_from_json/save_manifest (#1361 parity). Without this, running from a
   cwd != scan root cold-misses the cache and can split AST vs semantic caches.

Source edited in tools/skillgen/fragments/core/core.md; artifacts + expected/
regenerated via 'python -m tools.skillgen' (+ --bless). Full suite green
(2229 passed); skillgen + cache suites green (80 passed).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

2026-06-23 12:47:02 +01:00

..

graphify__always_on__agents-md.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__always_on__antigravity-rules.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__always_on__claude-md.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__always_on__gemini-md.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__always_on__kiro-steering.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__always_on__vscode-instructions.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skill-aider.md

Write a portable manifest.json from the skill runbooks (#1417)

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graphify__skill-amp.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-claw.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-codex.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-copilot.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-devin.md

Write a portable manifest.json from the skill runbooks (#1417)

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graphify__skill-droid.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-kilo.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-kiro.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-opencode.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-pi.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-trae.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-vscode.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill-windows.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

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graphify__skill.md

skill: add Step 4.5 graph-health gate + anchor caches on the scan root

2026-06-23 12:47:02 +01:00

graphify__skills__amp__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

2026-06-19 15:37:11 +01:00

graphify__skills__amp__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

2026-06-19 15:37:11 +01:00

graphify__skills__amp__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__amp__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__amp__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__amp__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__amp__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__amp__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

2026-06-22 17:29:33 +01:00

graphify__skills__claude__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__claude__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__claude__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__claude__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__claude__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__claude__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__claude__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__claude__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

2026-06-22 17:29:33 +01:00

graphify__skills__claw__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__claw__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__claw__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__claw__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__claw__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__claw__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__claw__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__claw__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

2026-06-22 17:29:33 +01:00

graphify__skills__codex__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__codex__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__codex__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__codex__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__codex__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__codex__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__codex__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__codex__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

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graphify__skills__copilot__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__copilot__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__copilot__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__copilot__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__copilot__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__copilot__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__copilot__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__copilot__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

2026-06-22 17:29:33 +01:00

graphify__skills__droid__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__droid__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__droid__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

2026-06-19 15:37:11 +01:00

graphify__skills__droid__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

2026-06-02 20:48:13 +01:00

graphify__skills__droid__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__droid__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__droid__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

2026-06-19 15:37:11 +01:00

graphify__skills__droid__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

2026-06-22 17:29:33 +01:00

graphify__skills__kilo__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__kilo__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__kilo__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__kilo__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__kilo__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__kilo__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__kilo__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__kilo__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

2026-06-22 17:29:33 +01:00

graphify__skills__kiro__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__kiro__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__kiro__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

2026-06-19 15:37:11 +01:00

graphify__skills__kiro__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__kiro__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__kiro__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__kiro__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__kiro__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

2026-06-22 17:29:33 +01:00

graphify__skills__opencode__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__opencode__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__opencode__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__opencode__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__opencode__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__opencode__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__opencode__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__opencode__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

2026-06-22 17:29:33 +01:00

graphify__skills__pi__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__pi__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__pi__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__pi__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__pi__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__pi__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__pi__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__pi__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

2026-06-22 17:29:33 +01:00

graphify__skills__trae__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__trae__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__trae__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__trae__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__trae__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__trae__references__query.md

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graphify__skills__trae__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__trae__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

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graphify__skills__vscode__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__vscode__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__vscode__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__vscode__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__vscode__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__vscode__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__vscode__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__vscode__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

2026-06-22 17:29:33 +01:00

graphify__skills__windows__references__add-watch.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__windows__references__exports.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__windows__references__extraction-spec.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__windows__references__github-and-merge.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__windows__references__hooks.md

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

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graphify__skills__windows__references__query.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__windows__references__transcribe.md

Fix remaining #1392 skill bugs: --directed propagation, content-only semantic scope, cache staleness, video update, transcribe robustness

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graphify__skills__windows__references__update.md

Write a portable manifest.json from the skill runbooks (#1417)

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