Lab 4. Multiclass Classification with RandomForest ============================================== Overview This lab will show you how to train a multiclass classifier using the Random Forest algorithm. You will also see how to evaluate the performance of multiclass models. By the end of the lab, you will be able to implement a Random Forest classifier, as well as tune hyperparameters in order to improve model performance. Training a Random Forest Classifier =================================== Let\'s see how we can train a Random Forest classifier on this dataset. First, we need to load the data from the GitHub repository using `pandas` and then we will print its first five rows using the `head()` method. ``` import pandas as pd file_url = 'https://raw.githubusercontent.com/fenago'\ '/data-science/master/Lab04/'\ 'Dataset/activity.csv' df = pd.read_csv(file_url) df.head() ``` The output will be as follows: ![](./images/B15019_04_01.jpg) Caption: First five rows of the dataset Each row represents an activity that was performed by a person and the name of the activity is stored in the `Activity` column. There are seven different activities in this variable: `bending1`, `bending2`, `cycling`, `lying`, `sitting`, `standing`, and `Walking`. The other six columns are different measurements taken from sensor data. In this example, you will accurately predict the target variable (`'Activity'`) from the features (the six other columns) using Random Forest. For example, for the first row of the preceding example, the model will receive the following features as input and will predict the `'bending1'` class: ![](./images/B15019_04_02.jpg) Caption: Features for the first row of the dataset But before that, we need to do a bit of data preparation. The `sklearn` package (we will use it to train Random Forest model) requires the target variable and the features to be separated. So, we need to extract the response variable using the `.pop()` method from `pandas`. The `.pop()` method extracts the specified column and removes it from the DataFrame: ``` target = df.pop('Activity') ``` The `sklearn` package provides a function called `train_test_split()` to randomly split the dataset into two different sets. We need to specify the following parameters for this function: the feature and target variables, the ratio of the testing set (`test_size`), and `random_state` in order to get reproducible results if we have to run the code again: ``` from sklearn.model_selection import train_test_split X_train, X_test, y_train, y_test = train_test_split\ (df, target, test_size=0.33, \ random_state=42) ``` Now that we have got our training and testing sets, we are ready for modeling. Let\'s first import the `RandomForestClassifier` class from `sklearn.ensemble`: ``` from sklearn.ensemble import RandomForestClassifier ``` This topic will be covered more in depth in *Lab 8, Hyperparameter Tuning*. For now, we will just specify the `random_state` value. We will walk you through some of the key hyperparameters in the following sections: ``` rf_model = RandomForestClassifier(random_state=1, \ n_estimators=10) ``` The next step is to train (also called fit) the model with the training data. During this step, the model will try to learn the relationship between the response variable and the independent variables and save the parameters learned. We need to specify the features and target variables as parameters: ``` rf_model.fit(X_train, y_train) ``` The output will be as follows: ![](./images/B15019_04_03.jpg) Caption: Logs of the trained RandomForest Now that the model has completed its training, we can use the parameters it learned to make predictions on the input data we will provide. In the following example, we are using the features from the training set: ``` preds = rf_model.predict(X_train) ``` Now we can print these predictions: ``` preds ``` The output will be as follows: ![](./images/B15019_04_04.jpg) Evaluating the Model\'s Performance =================================== If your model made 950 correct predictions out of 1,000 cases, then the accuracy score would be 950/1000 = 0.95. This would mean that your model was 95% accurate on that dataset. The `sklearn` package provides a function to calculate this score automatically and it is called `accuracy_score()`. We need to import it first: ``` from sklearn.metrics import accuracy_score ``` Then, we just need to provide the list of predictions for some observations and the corresponding true value for the target variable. Using the previous example, we will use the `y_train` and `preds` variables, which respectively contain the response variable (also known as the target) for the training set and the corresponding predictions made by the Random Forest model. We will reuse the predictions from the previous section -- `preds`: ``` accuracy_score(y_train, preds) ``` The output will be as follows: ![](./images/B15019_04_06.jpg) Let\'s calculate the accuracy score for the testing set: ``` test_preds = rf_model.predict(X_test) accuracy_score(y_test, test_preds) ``` The output will be as follows: ![](./images/B15019_04_07.jpg) Exercise 4.01: Building a Model for Classifying Animal Type and Assessing Its Performance ----------------------------------------------------------------------------------------- In this exercise, we will train a Random Forest classifier to predict the type of an animal based on its attributes and check its accuracy score: 1. Open a new Jupyter notebook. 2. Import the `pandas` package: ``` import pandas as pd ``` 3. Create a variable called `file_url` that contains the URL of the dataset: ``` file_url = 'https://raw.githubusercontent.com'\ '/fenago/data-science'\ '/master/Lab04/Dataset'\ '/openml_phpZNNasq.csv' ``` 4. Load the dataset into a DataFrame using the `.read_csv()` method from pandas: ``` df = pd.read_csv(file_url) ``` 5. Print the first five rows of the DataFrame: ``` df.head() ``` You should get the following output: ![](./images/B15019_04_08.jpg) Caption: First five rows of the DataFrame We will be using the `type` column as our target variable. We will need to remove the `animal` column from the DataFrame and only use the remaining columns as features. 6. Remove the `'animal'` column using the `.drop()` method from `pandas` and specify the `columns='animal'` and `inplace=True` parameters (to directly update the original DataFrame): ``` df.drop(columns='animal', inplace=True) ``` 7. Extract the `'type'` column using the `.pop()` method from `pandas`: ``` y = df.pop('type') ``` 8. Print the first five rows of the updated DataFrame: ``` df.head() ``` You should get the following output: ![](./images/B15019_04_09.jpg) Caption: First five rows of the DataFrame 9. Import the `train_test_split` function from `sklearn.model_selection`: ``` from sklearn.model_selection import train_test_split ``` 10. Split the dataset into training and testing sets with the `df`, `y`, `test_size=0.4`, and `random_state=188` parameters: ``` X_train, X_test, y_train, y_test = train_test_split\ (df, y, test_size=0.4, \ random_state=188) ``` 11. Import `RandomForestClassifier` from `sklearn.ensemble`: ``` from sklearn.ensemble import RandomForestClassifier ``` 12. Instantiate the `RandomForestClassifier` object with `random_state` equal to `42`. Set the `n-estimators` value to an initial default value of `10`. We\'ll discuss later how changing this value affects the result. ``` rf_model = RandomForestClassifier(random_state=42, \ n_estimators=10) ``` 13. Fit `RandomForestClassifier` with the training set: ``` rf_model.fit(X_train, y_train) ``` You should get the following output: ![](./images/B15019_04_10.jpg) Caption: Logs of RandomForestClassifier 14. Predict the outcome of the training set with the `.predict()`method, save the results in a variable called \'`train_preds`\', and print its value: ``` train_preds = rf_model.predict(X_train) train_preds ``` You should get the following output: ![](./images/B15019_04_11.jpg) Caption: Predictions on the training set 15. Import the `accuracy_score` function from `sklearn.metrics`: ``` from sklearn.metrics import accuracy_score ``` 16. Calculate the accuracy score on the training set, save the result in a variable called `train_acc`, and print its value: ``` train_acc = accuracy_score(y_train, train_preds) print(train_acc) ``` You should get the following output: ![](./images/B15019_04_12.jpg) Caption: Accuracy score on the training set 17. Predict the outcome of the testing set with the `.predict()` method and save the results into a variable called `test_preds`: ``` test_preds = rf_model.predict(X_test) ``` 18. Calculate the accuracy score on the testing set, save the result in a variable called `test_acc`, and print its value: ``` test_acc = accuracy_score(y_test, test_preds) print(test_acc) ``` You should get the following output: ![](./images/B15019_04_13.jpg) You can find out which version you are using by executing the following code: `import sklearn` `sklearn.__version__` In general, the higher the number of trees is, the better the performance you will get. Let\'s see what happens with `n_estimators = 2` on the Activity Recognition dataset: ``` rf_model2 = RandomForestClassifier(random_state=1, \ n_estimators=2) rf_model2.fit(X_train, y_train) preds2 = rf_model2.predict(X_train) test_preds2 = rf_model2.predict(X_test) print(accuracy_score(y_train, preds2)) print(accuracy_score(y_test, test_preds2)) ``` The output will be as follows: ![](./images/B15019_04_16.jpg) Caption: Accuracy of RandomForest with n\_estimators = 2 As expected, the accuracy is significantly lower than the previous example with `n_estimators = 10`. Let\'s now try with `50` trees: ``` rf_model3 = RandomForestClassifier(random_state=1, \ n_estimators=50) rf_model3.fit(X_train, y_train) preds3 = rf_model3.predict(X_train) test_preds3 = rf_model3.predict(X_test) print(accuracy_score(y_train, preds3)) print(accuracy_score(y_test, test_preds3)) ``` The output will be as follows: ![](./images/B15019_04_17.jpg) Caption: Accuracy of RandomForest with n\_estimators = 50 Exercise 4.02: Tuning n\_estimators to Reduce Overfitting --------------------------------------------------------- In this exercise, we will train a Random Forest classifier to predict the type of an animal based on its attributes and will try two different values for the `n_estimators` hyperparameter: We will be using the same zoo dataset as in the previous exercise. 1. Open a new Jupyter notebook. 2. Import the `pandas `package, `train_test_split`, `RandomForestClassifier`, and `accuracy_score` from `sklearn`: ``` import pandas as pd from sklearn.model_selection import train_test_split from sklearn.ensemble import RandomForestClassifier from sklearn.metrics import accuracy_score ``` 3. Create a variable called `file_url` that contains the URL to the dataset: ``` file_url = 'https://raw.githubusercontent.com'\ '/fenago/data-science'\ '/master/Lab04/Dataset'\ '/openml_phpZNNasq.csv' ``` 4. Load the dataset into a DataFrame using the `.read_csv()` method from `pandas`: ``` df = pd.read_csv(file_url) ``` 5. Remove the `animal` column using `.drop()` and then extract the `type` target variable into a new variable called `y` using `.pop()`: ``` df.drop(columns='animal', inplace=True) y = df.pop('type') ``` 6. Split the data into training and testing sets with `train_test_split()` and the `test_size=0.4` and `random_state=188` parameters: ``` X_train, X_test, y_train, y_test = train_test_split\ (df, y, test_size=0.4, \ random_state=188) ``` 7. Instantiate `RandomForestClassifier` with `random_state=42` and `n_estimators=1`, and then fit the model with the training set: ``` rf_model = RandomForestClassifier(random_state=42, \ n_estimators=1) rf_model.fit(X_train, y_train) ``` You should get the following output: ![](./images/B15019_04_18.jpg) Caption: Logs of RandomForestClassifier 8. Make predictions on the training and testing sets with `.predict()` and save the results into two new variables called `train_preds` and `test_preds`: ``` train_preds = rf_model.predict(X_train) test_preds = rf_model.predict(X_test) ``` 9. Calculate the accuracy score for the training and testing sets and save the results in two new variables called `train_acc` and `test_acc`: ``` train_acc = accuracy_score(y_train, train_preds) test_acc = accuracy_score(y_test, test_preds) ``` 10. Print the accuracy scores: `train_acc` and `test_acc`: ``` print(train_acc) print(test_acc) ``` You should get the following output: ![](./images/B15019_04_19.jpg) Caption: Accuracy scores for the training and testing sets The accuracy score decreased for both the training and testing sets. But now the difference is smaller compared to the results from *Exercise 4.01*, *Building a Model for Classifying Animal Type and Assessing Its Performance*. 11. Instantiate another `RandomForestClassifier` with `random_state=42` and `n_estimators=30`, and then fit the model with the training set: ``` rf_model2 = RandomForestClassifier(random_state=42, \ n_estimators=30) rf_model2.fit(X_train, y_train) ``` You should get the following output: ![](./images/B15019_04_20.jpg) Caption: Logs of RandomForest with n\_estimators = 30 12. Make predictions on the training and testing sets with `.predict()` and save the results into two new variables called `train_preds2` and `test_preds2`: ``` train_preds2 = rf_model2.predict(X_train) test_preds2 = rf_model2.predict(X_test) ``` 13. Calculate the accuracy score for the training and testing sets and save the results in two new variables called `train_acc2` and `test_acc2`: ``` train_acc2 = accuracy_score(y_train, train_preds2) test_acc2 = accuracy_score(y_test, test_preds2) ``` 14. Print the accuracy scores: `train_acc` and `test_acc`: ``` print(train_acc2) print(test_acc2) ``` You should get the following output: ![](./images/B15019_04_21.jpg) Caption: Accuracy scores for the training and testing sets Maximum Depth ============= In the previous section, we learned how Random Forest builds multiple trees to make predictions. Increasing the number of trees does improve model performance but it usually doesn\'t help much to decrease the risk of overfitting. Our model in the previous example is still performing much better on the training set (data it has already seen) than on the testing set (unseen data). So, we are not confident enough yet to say the model will perform well in production. There are different hyperparameters that can help to lower the risk of overfitting for Random Forest and one of them is called `max_depth`. This hyperparameter defines the depth of the trees built by Random Forest. Basically, it tells Random Forest model, how many nodes (questions) it can create before making predictions. But how will that help to reduce overfitting, you may ask. Well, let\'s say you built a single tree and set the `max_depth` hyperparameter to `50`. This would mean that there would be some cases where you could ask 49 different questions (the value `c` includes the final leaf node) before making a prediction. So, the logic would be `IF X1 > value1 AND X2 > value2 AND X1 <= value3 AND … AND X3 > value49 THEN predict class A`. As you can imagine, this is a very specific rule. In the end, it may apply to only a few observations in the training set, with this case appearing very infrequently. Therefore, your model would be overfitting. By default, the value of this `max_depth` parameter is `None`, which means there is no limit set for the depth of the trees. What you really want is to find some rules that are generic enough to be applied to bigger groups of observations. This is why it is recommended to not create deep trees with Random Forest. Let\'s try several values for this hyperparameter on the Activity Recognition dataset: `3`, `10`, and `50`: ``` rf_model4 = RandomForestClassifier(random_state=1, \ n_estimators=50, max_depth=3) rf_model4.fit(X_train, y_train) preds4 = rf_model4.predict(X_train) test_preds4 = rf_model4.predict(X_test) print(accuracy_score(y_train, preds4)) print(accuracy_score(y_test, test_preds4)) ``` You should get the following output: ![Caption: Accuracy scores for the training and testing sets and a max\_depth of 3 ](./images/B15019_04_22.jpg) Caption: Accuracy scores for the training and testing sets and a max\_depth of 3 For a `max_depth` of `3`, we got extremely similar results for the training and testing sets but the overall performance decreased drastically to `0.61`. Our model is not overfitting anymore, but it is now underfitting; that is, it is not predicting the target variable very well (only in `61%` of cases). Let\'s increase `max_depth` to `10`: ``` rf_model5 = RandomForestClassifier(random_state=1, \ n_estimators=50, \ max_depth=10) rf_model5.fit(X_train, y_train) preds5 = rf_model5.predict(X_train) test_preds5 = rf_model5.predict(X_test) print(accuracy_score(y_train, preds5)) print(accuracy_score(y_test, test_preds5)) ``` ![Caption: Accuracy scores for the training and testing sets and a max\_depth of 10 ](./images/B15019_04_23.jpg) Caption: Accuracy scores for the training and testing sets and a max\_depth of 10 The accuracy of the training set increased and is relatively close to the testing set. We are starting to get some good results, but the model is still slightly overfitting. Now we will see the results for `max_depth = 50`: ``` rf_model6 = RandomForestClassifier(random_state=1, \ n_estimators=50, \ max_depth=50) rf_model6.fit(X_train, y_train) preds6 = rf_model6.predict(X_train) test_preds6 = rf_model6.predict(X_test) print(accuracy_score(y_train, preds6)) print(accuracy_score(y_test, test_preds6)) ``` The output will be as follows: ![Caption: Accuracy scores for the training and testing sets and a max\_depth of 50 ](./images/B15019_04_24.jpg) Caption: Accuracy scores for the training and testing sets and a max\_depth of 50 The accuracy jumped to `0.99` for the training set but it didn\'t improve much for the testing set. So, the model is overfitting with `max_depth = 50`. It seems the sweet spot to get good predictions and not much overfitting is around `10` for the `max_depth` hyperparameter in this dataset. Exercise 4.03: Tuning max\_depth to Reduce Overfitting ------------------------------------------------------ In this exercise, we will keep tuning our RandomForest classifier that predicts animal type by trying two different values for the `max_depth` hyperparameter: We will be using the same zoo dataset as in the previous exercise. 1. Open a new Jupyter notebook. 2. Import the `pandas` package, `train_test_split`, `RandomForestClassifier`, and `accuracy_score` from `sklearn`: ``` import pandas as pd from sklearn.model_selection import train_test_split from sklearn.ensemble import RandomForestClassifier from sklearn.metrics import accuracy_score ``` 3. Create a variable called `file_url` that contains the URL to the dataset: ``` file_url = 'https://raw.githubusercontent.com'\ 'fenago/data-science'\ '/master/Lab04/Dataset'\ '/openml_phpZNNasq.csv' ``` 4. Load the dataset into a DataFrame using the `.read_csv()` method from `pandas`: ``` df = pd.read_csv(file_url) ``` 5. Remove the `animal` column using `.drop()` and then extract the `type` target variable into a new variable called `y` using `.pop()`: ``` df.drop(columns='animal', inplace=True) y = df.pop('type') ``` 6. Split the data into training and testing sets with `train_test_split()` and the parameters `test_size=0.4` and `random_state=188`: ``` X_train, X_test, y_train, y_test = train_test_split\ (df, y, test_size=0.4, \ random_state=188) ``` 7. Instantiate `RandomForestClassifier` with `random_state=42`, `n_estimators=30`, and `max_depth=5`, and then fit the model with the training set: ``` rf_model = RandomForestClassifier(random_state=42, \ n_estimators=30, \ max_depth=5) rf_model.fit(X_train, y_train) ``` You should get the following output: ![](./images/B15019_04_25.jpg) Caption: Logs of RandomForest 8. Make predictions on the training and testing sets with `.predict()` and save the results into two new variables called `train_preds` and `test_preds`: ``` train_preds = rf_model.predict(X_train) test_preds = rf_model.predict(X_test) ``` 9. Calculate the accuracy score for the training and testing sets and save the results in two new variables called `train_acc` and `test_acc`: ``` train_acc = accuracy_score(y_train, train_preds) test_acc = accuracy_score(y_test, test_preds) ``` 10. Print the accuracy scores: `train_acc` and `test_acc`: ``` print(train_acc) print(test_acc) ``` You should get the following output: ![](./images/B15019_04_26.jpg) Caption: Accuracy scores for the training and testing sets We got the exact same accuracy scores as for the best result we obtained in the previous exercise. This value for the `max_depth` hyperparameter hasn\'t impacted the model\'s performance. 11. Instantiate another `RandomForestClassifier` with `random_state=42`, `n_estimators=30`, and `max_depth=2`, and then fit the model with the training set: ``` rf_model2 = RandomForestClassifier(random_state=42, \ n_estimators=30, \ max_depth=2) rf_model2.fit(X_train, y_train) ``` You should get the following output: ![](./images/B15019_04_27.jpg) Caption: Logs of RandomForestClassifier with max\_depth = 2 12. Make predictions on the training and testing sets with `.predict()` and save the results into two new variables called `train_preds2 `and `test_preds2`: ``` train_preds2 = rf_model2.predict(X_train) test_preds2 = rf_model2.predict(X_test) ``` 13. Calculate the accuracy scores for the training and testing sets and save the results in two new variables called `train_acc2` and `test_acc2`: ``` train_acc2 = accuracy_score(y_train, train_preds2) test_acc2 = accuracy_score(y_test, test_preds2) ``` 14. Print the accuracy scores: `train_acc` and `test_acc`: ``` print(train_acc2) print(test_acc2) ``` You should get the following output: ![](./images/B15019_04_28.jpg) Minimum Sample in Leaf ====================== It would be great if we could let the model know to not create such specific rules that happen quite infrequently. Luckily, `RandomForest` has such a hyperparameter and, you guessed it, it is `min_samples_leaf`. This hyperparameter will specify the minimum number of observations (or samples) that will have to fall under a leaf node to be considered in the tree. For instance, if we set `min_samples_leaf` to `3`, then `RandomForest` will only consider a split that leads to at least three observations on both the left and right leaf nodes. If this condition is not met for a split, the model will not consider it and will exclude it from the tree. The default value in `sklearn` for this hyperparameter is `1`. Let\'s try to find the optimal value for `min_samples_leaf` for the Activity Recognition dataset: ``` rf_model7 = RandomForestClassifier(random_state=1, \ n_estimators=50, \ max_depth=10, \ min_samples_leaf=3) rf_model7.fit(X_train, y_train) preds7 = rf_model7.predict(X_train) test_preds7 = rf_model7.predict(X_test) print(accuracy_score(y_train, preds7)) print(accuracy_score(y_test, test_preds7)) ``` The output will be as follows: ![](./images/B15019_04_29.jpg) Caption: Accuracy scores for the training and testing sets for min\_samples\_leaf=3 With `min_samples_leaf=3`, the accuracy for both the training and testing sets didn\'t change much compared to the best model we found in the previous section. Let\'s try increasing it to `10`: ``` rf_model8 = RandomForestClassifier(random_state=1, \ n_estimators=50, \ max_depth=10, \ min_samples_leaf=10) rf_model8.fit(X_train, y_train) preds8 = rf_model8.predict(X_train) test_preds8 = rf_model8.predict(X_test) print(accuracy_score(y_train, preds8)) print(accuracy_score(y_test, test_preds8)) ``` The output will be as follows: ![Caption: Accuracy scores for the training and testing sets for min\_samples\_leaf=10 ](./images/B15019_04_30.jpg) Caption: Accuracy scores for the training and testing sets for min\_samples\_leaf=10 Now the accuracy of the training set dropped a bit but increased for the testing set and their difference is smaller now. So, our model is overfitting less. Let\'s try another value for this hyperparameter -- `25`: ``` rf_model9 = RandomForestClassifier(random_state=1, \ n_estimators=50, \ max_depth=10, \ min_samples_leaf=25) rf_model9.fit(X_train, y_train) preds9 = rf_model9.predict(X_train) test_preds9 = rf_model9.predict(X_test) print(accuracy_score(y_train, preds9)) print(accuracy_score(y_test, test_preds9)) ``` The output will be as follows: ![](./images/B15019_04_31.jpg) Exercise 4.04: Tuning min\_samples\_leaf ---------------------------------------- In this exercise, we will keep tuning our Random Forest classifier that predicts animal type by trying two different values for the `min_samples_leaf` hyperparameter: We will be using the same zoo dataset as in the previous exercise. 1. Open a new Jupyter notebook. 2. Import the `pandas` package, `train_test_split`, `RandomForestClassifier`, and `accuracy_score` from `sklearn`: ``` import pandas as pd from sklearn.model_selection import train_test_split from sklearn.ensemble import RandomForestClassifier from sklearn.metrics import accuracy_score ``` 3. Create a variable called `file_url` that contains the URL to the dataset: ``` file_url = 'https://raw.githubusercontent.com'\ '/fenago/data-science'\ '/master/Lab04/Dataset/openml_phpZNNasq.csv' ``` 4. Load the dataset into a DataFrame using the `.read_csv()` method from `pandas`: ``` df = pd.read_csv(file_url) ``` 5. Remove the `animal` column using `.drop()` and then extract the `type` target variable into a new variable called `y` using `.pop()`: ``` df.drop(columns='animal', inplace=True) y = df.pop('type') ``` 6. Split the data into training and testing sets with `train_test_split()` and the parameters `test_size=0.4` and `random_state=188`: ``` X_train, X_test, \ y_train, y_test = train_test_split(df, y, test_size=0.4, \ random_state=188) ``` 7. Instantiate `RandomForestClassifier` with `random_state=42`, `n_estimators=30`, `max_depth=2`, and `min_samples_leaf=3`, and then fit the model with the training set: ``` rf_model = RandomForestClassifier(random_state=42, \ n_estimators=30, \ max_depth=2, \ min_samples_leaf=3) rf_model.fit(X_train, y_train) ``` You should get the following output: ![](./images/B15019_04_32.jpg) Caption: Logs of RandomForest 8. Make predictions on the training and testing sets with `.predict()` and save the results into two new variables called `train_preds` and `test_preds`: ``` train_preds = rf_model.predict(X_train) test_preds = rf_model.predict(X_test) ``` 9. Calculate the accuracy score for the training and testing sets and save the results in two new variables called `train_acc` and `test_acc`: ``` train_acc = accuracy_score(y_train, train_preds) test_acc = accuracy_score(y_test, test_preds) ``` 10. Print the accuracy score -- `train_acc` and `test_acc`: ``` print(train_acc) print(test_acc) ``` You should get the following output: ![](./images/B15019_04_33.jpg) 11. Instantiate another `RandomForestClassifier` with `random_state=42`, `n_estimators=30`, `max_depth=2`, and `min_samples_leaf=7`, and then fit the model with the training set: ``` rf_model2 = RandomForestClassifier(random_state=42, \ n_estimators=30, \ max_depth=2, \ min_samples_leaf=7) rf_model2.fit(X_train, y_train) ``` You should get the following output: ![](./images/B15019_04_34.jpg) Caption: Logs of RandomForest with max\_depth=2 12. Make predictions on the training and testing sets with `.predict()` and save the results into two new variables called `train_preds2` and `test_preds2`: ``` train_preds2 = rf_model2.predict(X_train) test_preds2 = rf_model2.predict(X_test) ``` 13. Calculate the accuracy score for the training and testing sets and save the results in two new variables called `train_acc2` and `test_acc2`: ``` train_acc2 = accuracy_score(y_train, train_preds2) test_acc2 = accuracy_score(y_test, test_preds2) ``` 14. Print the accuracy scores: `train_acc` and `test_acc`: ``` print(train_acc2) print(test_acc2) ``` You should get the following output: ![](./images/B15019_04_35.jpg) Maximum Features ================ Let\'s try three different values on the activity dataset. First, we will specify the maximum number of features as two: ``` rf_model10 = RandomForestClassifier(random_state=1, \ n_estimators=50, \ max_depth=10, \ min_samples_leaf=25, \ max_features=2) rf_model10.fit(X_train, y_train) preds10 = rf_model10.predict(X_train) test_preds10 = rf_model10.predict(X_test) print(accuracy_score(y_train, preds10)) print(accuracy_score(y_test, test_preds10)) ``` The output will be as follows: ![Caption: Accuracy scores for the training and testing sets for max\_features=2 ](./images/B15019_04_36.jpg) Caption: Accuracy scores for the training and testing sets for max\_features=2 We got results similar to those of the best model we trained in the previous section. This is not really surprising as we were using the default value of `max_features` at that time, which is `sqrt`. The square root of `2` equals `1.45`, which is quite close to `2`. This time, let\'s try with the ratio `0.7`: ``` rf_model11 = RandomForestClassifier(random_state=1, \ n_estimators=50, \ max_depth=10, \ min_samples_leaf=25, \ max_features=0.7) rf_model11.fit(X_train, y_train) preds11 = rf_model11.predict(X_train) test_preds11 = rf_model11.predict(X_test) print(accuracy_score(y_train, preds11)) print(accuracy_score(y_test, test_preds11)) ``` The output will be as follows: ![ ](./images/B15019_04_37.jpg) With this ratio, both accuracy scores increased for the training and testing sets and the difference between them is less. Our model is overfitting less now and has slightly improved its predictive power. Let\'s give it a shot with the `log2` option: ``` rf_model12 = RandomForestClassifier(random_state=1, \ n_estimators=50, \ max_depth=10, \ min_samples_leaf=25, \ max_features='log2') rf_model12.fit(X_train, y_train) preds12 = rf_model12.predict(X_train) test_preds12 = rf_model12.predict(X_test) print(accuracy_score(y_train, preds12)) print(accuracy_score(y_test, test_preds12)) ``` The output will be as follows: ![](./images/B15019_04_38.jpg) Exercise 4.05: Tuning max\_features ----------------------------------- In this exercise, we will keep tuning our RandomForest classifier that predicts animal type by trying two different values for the `max_features` hyperparameter: We will be using the same zoo dataset as in the previous exercise. 1. Open a new Jupyter notebook. 2. Import the `pandas` package, `train_test_split`, `RandomForestClassifier`, and `accuracy_score` from `sklearn`: ``` import pandas as pd from sklearn.model_selection import train_test_split from sklearn.ensemble import RandomForestClassifier from sklearn.metrics import accuracy_score ``` 3. Create a variable called `file_url` that contains the URL to the dataset: ``` file_url = 'https://raw.githubusercontent.com'\ '/fenago/data-science'\ '/master/Lab04/Dataset/openml_phpZNNasq.csv' ``` 4. Load the dataset into a DataFrame using the `.read_csv()` method from `pandas`: ``` df = pd.read_csv(file_url) ``` 5. Remove the `animal` column using `.drop()` and then extract the `type` target variable into a new variable called `y` using `.pop()`: ``` df.drop(columns='animal', inplace=True) y = df.pop('type') ``` 6. Split the data into training and testing sets with `train_test_split()` and the parameters `test_size=0.4` and `random_state=188`: ``` X_train, X_test, \ y_train, y_test = train_test_split(df, y, test_size=0.4, \ random_state=188) ``` 7. Instantiate `RandomForestClassifier` with `random_state=42`, `n_estimators=30`, `max_depth=2`, `min_samples_leaf=7`, and `max_features=10`, and then fit the model with the training set: ``` rf_model = RandomForestClassifier(random_state=42, \ n_estimators=30, \ max_depth=2, \ min_samples_leaf=7, \ max_features=10) rf_model.fit(X_train, y_train) ``` You should get the following output: ![](./images/B15019_04_39.jpg) Caption: Logs of RandomForest 8. Make predictions on the training and testing sets with `.predict()` and save the results into two new variables called `train_preds` and `test_preds`: ``` train_preds = rf_model.predict(X_train) test_preds = rf_model.predict(X_test) ``` 9. Calculate the accuracy scores for the training and testing sets and save the results in two new variables called `train_acc` and `test_acc`: ``` train_acc = accuracy_score(y_train, train_preds) test_acc = accuracy_score(y_test, test_preds) ``` 10. Print the accuracy scores: `train_acc` and `test_acc`: ``` print(train_acc) print(test_acc) ``` You should get the following output: ![](./images/B15019_04_40.jpg) Caption: Accuracy scores for the training and testing sets 11. Instantiate another `RandomForestClassifier` with `random_state=42`, `n_estimators=30`, `max_depth=2`, `min_samples_leaf=7`, and `max_features=0.2`, and then fit the model with the training set: ``` rf_model2 = RandomForestClassifier(random_state=42, \ n_estimators=30, \ max_depth=2, \ min_samples_leaf=7, \ max_features=0.2) rf_model2.fit(X_train, y_train) ``` You should get the following output: ![](./images/B15019_04_41.jpg) Caption: Logs of RandomForest with max\_features = 0.2 12. Make predictions on the training and testing sets with `.predict()` and save the results into two new variables called `train_preds2` and `test_preds2`: ``` train_preds2 = rf_model2.predict(X_train) test_preds2 = rf_model2.predict(X_test) ``` 13. Calculate the accuracy score for the training and testing sets and save the results in two new variables called `train_acc2` and `test_acc2`: ``` train_acc2 = accuracy_score(y_train, train_preds2) test_acc2 = accuracy_score(y_test, test_preds2) ``` 14. Print the accuracy scores: `train_acc` and `test_acc`: ``` print(train_acc2) print(test_acc2) ``` You should get the following output: ![](./images/B15019_04_42.jpg) Activity 4.01: Train a Random Forest Classifier on the ISOLET Dataset --------------------------------------------------------------------- You are working for a technology company and they are planning to launch a new voice assistant product. You have been tasked with building a classification model that will recognize the letters spelled out by a user based on the signal frequencies captured. Each sound can be captured and represented as a signal composed of multiple frequencies. The following steps will help you to complete this activity: 1. Download and load the dataset using `.read_csv()` from `pandas`. 2. Extract the response variable using `.pop()` from `pandas`. 3. Split the dataset into training and test sets using `train_test_split()` from `sklearn.model_selection`. 4. Create a function that will instantiate and fit a `RandomForestClassifier` using `.fit()` from `sklearn.ensemble`. 5. Create a function that will predict the outcome for the training and testing sets using `.predict()`. 6. Create a function that will print the accuracy score for the training and testing sets using `accuracy_score()` from `sklearn.metrics`. 7. Train and get the accuracy score for a range of different hyperparameters. Here are some options you can try: - `n_estimators = 20` and `50` - `max_depth = 5` and `10` - `min_samples_leaf = 10` and `50` - `max_features = 0.5` and `0.3` 8. Select the best hyperparameter value. These are the accuracy scores for the best model we trained: ![](./images/B15019_04_43.jpg) Summary ======= We have finally reached the end of this lab on multiclass classification with Random Forest. We learned that multiclass classification is an extension of binary classification: instead of predicting only two classes, target variables can have many more values. We saw how we can train a Random Forest model in just a few lines of code and assess its performance by calculating the accuracy score for the training and testing sets. Finally, we learned how to tune some of its most important hyperparameters: `n_estimators`, `max_depth`, `min_samples_leaf`, and `max_features`. We also saw how their values can have a significant impact on the predictive power of a model but also on its ability to generalize to unseen data.