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189 lines
3.8 KiB
Plaintext
189 lines
3.8 KiB
Plaintext
{
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"cells": [
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {},
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"colab_type": "code",
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"id": "tH3lvFAXfjGz"
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},
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"outputs": [],
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"source": [
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"# import libraries \n",
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"\n",
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"import pandas as pd \n",
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"\n",
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"from sklearn.model_selection import train_test_split \n",
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"\n",
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"from sklearn.linear_model import LinearRegression "
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {},
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"colab_type": "code",
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"id": "O0ob0P0RftvC"
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},
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"outputs": [],
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"source": [
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"# column headers \n",
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"\n",
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"_headers = ['CIC0', 'SM1', 'GATS1i', 'NdsCH', 'Ndssc', 'MLOGP', 'response'] \n",
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"\n",
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"# read in data \n",
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"\n",
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"df = pd.read_csv('../Dataset/qsar_fish_toxicity.csv', names=_headers, sep=';') "
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {
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"base_uri": "https://localhost:8080/",
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"height": 194
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},
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"colab_type": "code",
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"id": "RbFPJeOKfvFx",
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"outputId": "20b9e550-bcb8-49c7-a589-f08b9cd48754"
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},
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"outputs": [],
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"source": [
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"df.head()"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {},
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"colab_type": "code",
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"id": "wS62XTnDf1VC"
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},
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"outputs": [],
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"source": [
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"# Let's split our data \n",
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"\n",
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"features = df.drop('response', axis=1).values \n",
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"\n",
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"labels = df[['response']].values \n",
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"\n",
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" \n",
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"\n",
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"X_train, X_eval, y_train, y_eval = train_test_split(features, labels, test_size=0.2, random_state=0) \n",
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"\n",
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"X_val, X_test, y_val, y_test = train_test_split(X_eval, y_eval, random_state=0) "
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {},
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"colab_type": "code",
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"id": "h2BBicmsf5Gi"
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},
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"outputs": [],
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"source": [
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"model = LinearRegression() "
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {
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"base_uri": "https://localhost:8080/",
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"height": 35
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},
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"colab_type": "code",
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"id": "Sbmn6Wfif6sa",
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"outputId": "819c811a-ec55-46a7-a4b2-a6c20facaecc"
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},
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"outputs": [],
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"source": [
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"model.fit(X_train, y_train) "
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {},
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"colab_type": "code",
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"id": "j52nxGrLf_Y6"
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},
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"outputs": [],
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"source": [
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"y_pred = model.predict(X_val) "
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {
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"base_uri": "https://localhost:8080/",
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"height": 35
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},
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"colab_type": "code",
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"id": "dboYPiDhgAzS",
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"outputId": "354432d9-670c-4d5e-96ba-62b79733f930"
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},
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"outputs": [],
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"source": [
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"r2 = model.score(X_val, y_val) \n",
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"\n",
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"print('R^2 score: {}'.format(r2)) "
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {
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"base_uri": "https://localhost:8080/",
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"height": 194
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},
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"colab_type": "code",
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"id": "KWhxdfXmgZPk",
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"outputId": "f0602638-2383-4df3-8286-9225ca272cb0"
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},
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"outputs": [],
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"source": [
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"_ys = pd.DataFrame(dict(actuals=y_val.reshape(-1), predicted=y_pred.reshape(-1))) \n",
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"\n",
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"_ys.head() "
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]
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}
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],
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"metadata": {
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"colab": {
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"name": "Exercise6_02.ipynb",
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"provenance": []
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},
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"kernelspec": {
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"display_name": "Python 3",
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"language": "python",
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"name": "python3"
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},
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"language_info": {
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"codemirror_mode": {
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"name": "ipython",
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"version": 3
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},
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"file_extension": ".py",
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"mimetype": "text/x-python",
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"name": "python",
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"nbconvert_exporter": "python",
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"pygments_lexer": "ipython3",
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"version": "3.8.6"
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}
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},
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"nbformat": 4,
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"nbformat_minor": 1
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}
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