* fix(cli): accept --flag=value for global output flags
`rea <command> --format=json` failed with "Unknown flag: --format".
`--filter-output=...`, `--token-limit=...` and `--token-offset=...`
failed the same way. Incur reads these global flags only in spaced form,
so the equals form fell through to the command parser. Command options
already accept both forms, and `rea mcp doctor` parses `--format=` itself.
A valued output flag with no value (`--format` last, or `--format=`)
also reported the flag as unknown with code UNKNOWN.
normalizeCliOutputArguments, in the module that owns output-argument
interpretation, now splits the equals forms of the four valued output
flags. The entry point passes the normalized argv to rea's output
validation and to Incur, so both read the same effective values. A
missing value now fails with MISSING_OUTPUT_VALUE and names the flag.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* fix(cli): detect missing output values while parsing output flags
The missing-value check scanned argv again after parsing, so it also
checked tokens the parser had already consumed as values. For example,
`--filter-output --format` selects the field `--format`, yet the second
scan reported `--format` as missing a value. parseCliOutputArguments
now records the first valued flag it skips for lack of a value, in the
same pass that consumes values.
Cover normalizeCliOutputArguments directly: values containing `=`, empty
values, and command options that only share a prefix. Export it in the
dispatcher test's runtime stub as well.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
* fix(cli): stop quietly when the stdout reader closes early
`rea ... | head` crashed once head closed the pipe. TOON and YAML output
raised an unhandled EPIPE 'error' event with a Node stack trace. JSON
output reported {"code":"UNKNOWN","message":"write EPIPE"} on stderr.
Both exited 1, as if the analysis had failed.
The CLI entry point owns process.stdout, so it now treats EPIPE as the
reader declining the rest of the output. It stops writing, suppresses
the failure report and exits 141 like a SIGPIPE-terminated writer, also
when Incur exits through its own failure path. Other stdout errors are
handled as before.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* fix(cli): guard mcp doctor output and cover midstream reader closure
The closed-reader guard was only installed for ordinary CLI commands. As a
result `rea mcp doctor | head` still crashed on EPIPE. The guard now lives
in one entry-point function shared by both CLI branches; MCP stdio keeps
its own lifecycle.
The tests now also close the reader after the first chunk of a 4 MiB
streamed JSON result, so later writes in writeJsonOutput are covered.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Follow-up to #2345; thanks to @gefrezim for the import-time home lookup diagnosis.
Normalize only an empty Windows USERPROFILE before runtime dependency imports, preserving all nonempty caller selections. Reuse the existing public setup dry-run regression in the Windows curated CI lane. No additional filesystem query, engine call, cache or retry.
Verified real Windows Node 24.18.0 CLI unset/empty/selected-profile controls, setup dry-run home selection and unchanged configuration, and baseline/candidate SDK stdio MCP catalogue parity. Nine related tests and static/docs checks passed. No IDA or Ghidra engine was used. Scoped resource observations and measurement limits are recorded in experiments/analysis-efficiency/windows-empty-profile.md.
Fixed the review finding and original CI package-scope ownership failure. Current-head CI is green; the unrelated MCP identity timeout passed on a failed-job rerun without changing its code or timeout. Current-head review completed with no further findings.
createCli parsed REA_LOG_LEVEL with a throwing schema, so an invalid or
uppercase value crashed every command, including doctor and --help, with
a ZodError stack trace. Parse it into a ConfigurationError result and have
the executable print the same configuration message as the MCP adapter
and exit 1 before building the CLI.
Fixes#2135
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Bundle ordinary CLI and output entries to reduce Windows module filesystem resolution while preserving source URLs, lazy loading and worker resources. Keep release identity in its shared owning module.
Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
BREAKING CHANGE: comparison tools now require session-owned Evidence IDs or approved bundle paths, and structured Evidence results use compact references.
