Add explicit summary, facet, item and paged views of retained analysis Evidence without repeating analysis. Preserve captured observations, graph validation, artifact identity, coverage and complete default results.
Fixes#1050
Verified with focused source, CLI, pinned-SDK schema and MCP tests, serial static checks, and one complete native Windows Notion ASAR workflow. Real Hopper/Ghidra verification was not performed for this provider-independent projection change.
Co-authored-by: Matt Van Horn <455140+mvanhorn@users.noreply.github.com>
* fix: Handle relayed SIGINT gracefully in withProcessCancellation
Changes `process.once` to `process.on` for SIGINT in `DirectAnalysis.ts`.
When REA is launched via npx, a single process-group SIGINT triggers two
SIGINT events (one direct, one relayed). Previously, the first event would
consume the handler and the second would abruptly terminate the Node process,
abandoning Ghidra resource cleanup.
This change ensures subsequent SIGINTs idempotently request cancellation
without crashing the process, matching the behaviour of `withCommandCancellation`.
* fix(cli): keep termination guards through provider cleanup
* test(cli): exercise repeated analysis signals on macOS
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Co-authored-by: N0zoM1z0 <1705004398@qq.com>
When removing Ghidra's private runtime directory failed, close_binary
reported only a generic `provider-client` resource, and a later close,
after the permission was restored, returned success while the directory
and its contents remained. The client dropped its reference to the root
before removing it, and PrivateRuntimeRoot cached the rejected removal.
Keep each runtime or socket root until its removal succeeds, report a
failure as a ProviderCleanupError naming the leftover paths, let
PrivateRuntimeRoot retry a failed removal, and pass such typed cleanup
failures through closeAnalysisClient instead of replacing them.
Fixes#1190
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Target admission accepted a thin Mach-O after reading only its magic and
CPU type, so a 12-byte prefix opened as a valid arm64 executable and the
first provider query failed as a generic execution failure. ELF headers
were likewise accepted after 20 bytes, and a FAT file whose selected slice
lies beyond its end was admitted.
Require the complete fixed header (Mach-O 28 or 32 bytes, ELF 52 or 64),
Mach-O load commands that fit in the file, and a selected FAT slice within
the file, checking commitments against the file size rather than the
probed prefix. Each refusal names the failed constraint.
Fixes#1189
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
A selected package exports target names one file, and Node tries no
extension or directory index for it. REA still resolved it like a relative
specifier, so `exports: "./file"` with only `file.js` present, or
`"./folder"` with only `folder/index.js`, reported a resolved import that
Node rejects under both import and require.
Resolve an exports target only to its exact file and otherwise report
not-found with a limitation naming the target. Legacy main entries keep
their extension and index fallbacks.
Fixes#1174
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
`rea doctor`, documented as strictly read-only, ran
`brew --prefix --cask hopper-disassembler` when Hopper was not in a
standard location. Current Homebrew rejects that option combination, but
any brew command naming a cask first fetches the cask API, so each doctor
run wrote about 600 files (36 MB) into the user's Homebrew cache.
Ask brew only for its Caskroom, which brew answers without loading the
cask API, and read the application directory Homebrew recorded in the
Hopper cask's install receipt.
Fixes#1165
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
A configuration that passes the preflight can still fail when uninstall
rereads it to edit, for example when it changes concurrently. Rereading
keeps that edit from overwriting the newer file; stopping at the failure
keeps later clients, the skill, and REA data from being removed.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Setup and uninstall rewrote the whole Codex config.toml with a fresh TOML
serializer, which dropped every comment and respelled unrelated values,
although the plan promises to preserve unrelated configuration. Grok Build
already edited only REA's server tables.
Share that table editor with Codex, without Grok's root
disabled_mcp_servers handling, keep the original final line break, and
fall back to the full rewrite only when the edited text would not parse to
the requested document.
Fixes#1163
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
The installation guide says malformed client configuration stops
`rea uninstall`, but uninstall reported that client as failed and still
removed other clients' registrations, the bundled skill, and with
--purge-data REA's cache and state.
Inspect every client configuration first, using the conditions setup
already treats as blocking (unsafe path, unreadable file, malformed
document), and stop before any removal when one fails. Purge paths that are
symbolic links are still retained and reported per item, as the guide now
states.
Fixes#1164
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
binary_session reported native and artifact operations available whenever
their provider declared them, although these operations run on the active
target: in a closed session every call failed with target_unavailable, and
Mach-O-only operations stayed available with a ZIP or ELF target open.
Report target_required for every session-bound contract kind in a closed
session, and target_unsupported for Mach-O-only operations unless the open
target is a Mach-O executable. A host limitation is reported before target
selection, since opening a target cannot fix it; composed operations keep
deciding from their requirements.
Fixes#1166
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* fix(javascript): omit self-referential static references with disclosure
A bundled module that requires its own key (`r(50)` inside webpack
module 50) resolved, through the static-reference composer, to its own
module node. The resulting self-referential imports edge failed result
validation and lost the entire analysis ("Result schema rejected 1
issue ... (custom)"). This is the same invariant as #1146; #1152 fixed
the bundler async-chunk composer, and this is the remaining adjacent
composer.
Skip a reference whose resolved target is its own source, count it, and
disclose the omission the way #1152 discloses async-chunk references.
Sibling requires are kept.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* refactor(javascript): share the self-reference omission disclosure
The self-import (#1130), async-chunk (#1152) and static-reference
disclosures repeated one sentence template in three composers, and the
new test repeated the analyze-and-check sequence of its neighbour. That
put jscpd at its 2.5% threshold. Share the template through
selfReferenceOmissions with identical wording, and share one test helper
for the graph-wide self-reference invariants.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
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Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
* fix(javascript): omit self-referential import edges with disclosure
A specifier that resolves back to the importing module itself produced an
imports edge from a module to itself, which the application graph schema
forbids; one such specifier failed result validation and lost the whole
analysis. Skip those edges at composition time and disclose the omission
count in the graph limitations.
Fixes#1129
* test(javascript): verify self-import behavior through the compiled CLI
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Co-authored-by: BaaRai <baarai@users.noreply.github.com>
Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>
* fix(setup): treat empty client config files as new documents
An empty MCP config file (for example Antigravity's mcp_config.json, which
the client can create with zero bytes) was reported as malformed, which
blocked rea setup from configuring every other detected agent. Parse a
whitespace- or BOM-only JSON/JSONC file as an empty document and write a
fresh document over it.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* test(setup): use explicit unicode escape for BOM-only empty config case
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Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>
* fix(update): accept npm 12 release metadata
(cherry picked from commit aa400d18c9)
* fix(update): classify npm release metadata without a spawn mock
Keep the npm 11 string and npm 12 one-element array accepted by the
cherry-picked lookup, and separate invalid metadata from a failed
registry command.
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Co-authored-by: Dapo Olaomo <penielgold@gmail.com>
* feat(clients): register Grok Build and Grok Bot during setup
Detect both clients and install the local REA MCP registration the same
way setup already handles the other agents. Grok Build edits only the
REA tables in its TOML config and sets startup_timeout_sec to 30. Grok
Bot writes the mcpServers.rea entry into mcp.json. That file is the
registration to add to the signed-in account; setup does not call the
account API.
Filed by Grok.
* fix(clients): clear a disabled Grok Build registration during setup
Grok Build keeps a server suppressed when its name stays in
disabled_mcp_servers, and setup was treating that file as already aligned.
Setup now removes only that name, doctor reports the registration stale until
it is gone, and uninstall keeps comments in an inline table whose only server
was REA. Split the lifecycle suite and reflow the get-started page so static
checks pass.
* fix(verify): check packed Hopper search as literal-only
The package verifier still called a regex probe that main deleted. The
native bridge refuses regex and joins string hits with typed records, so
the restored probe stubs that inventory and the check asserts the literal
matches and the regex refusal. The new README translations also name
Grok Build and Grok Bot.
* fix(clients): stop treating a Grok Bot data directory as registered
Grok Bot stores connectors in the signed-in account and runs them on its
hosted computer. Setup no longer writes mcp.json or reports that file as
aligned. Doctor and setup tell the caller to add the server from the
Grok Bot chat.
* fix(clients): drop multiline Grok disable-list entries
Decode disabled_mcp_servers strings with the document parser so a
multiline basic or literal string that loads as rea is removed.
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Co-authored-by: Grok <eugene.ray@gmail.com>
Co-authored-by: Cursor Agent <cursoragent@cursor.com>
Co-authored-by: morluto <morluto@users.noreply.github.com>
Collect references from the complete owned function body and exact entry,
including instruction-interior destinations and embedded-data sources.
Bind the corrected semantics to the analysis profile so legacy snapshots
cannot replay incomplete results. Preserve snapshot mismatch reasons and
recovery advice through CLI and MCP without disturbing live sessions.
Return exact entry candidates for ambiguous function names. Expand the
real-provider regression workflow and replace redundant parser assertions
with malformed-output coverage through the pinned MCP client.
Verified with Ghidra 12.1.4 on macOS arm64: full host-native lane, real
CLI/MCP boundary probes, 30 focused tests, and typecheck/lint.
Preserve native document identity, nullable bookmark labels, address diagnostics, segment-end byte prefixes, and verified file mappings. Validate batch rename addresses before mutation.
BREAKING CHANGE: remove set_current_document. Use open_binary to switch targets; document arguments are scoped to the active target.
* test(javascript): reproduce TypeScript source dialect loss
Add native directory/ASAR and built public CLI owners with actual locked native TypeScript syntax/emit and independent Babel source-range oracles. Production and every workflow remain unchanged.
Signed-off-by: Rudy Celekli <rudy@gradiahq.com>
* test(javascript): admit isolated native compiler inputs
Use the actual TypeScript7 producer-requested --ignoreConfig flag when supplying isolated source filenames. Preserve every graph input, owning assertion, control and production file.
Signed-off-by: Rudy Celekli <rudy@gradiahq.com>
* fix(javascript): parse plain TypeScript artifacts without JSX
Select the plain .ts dialect using the artifact source path so valid angle-bracket assertions retain syntax-derived graph facts. Preserve existing JSX defaults and all other dialects. Document the inert artifact parser contract.
Signed-off-by: Rudy Celekli <rudy@gradiahq.com>
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Signed-off-by: Rudy Celekli <rudy@gradiahq.com>
* fix(hopper): diagnose MCP provider failures with stage, state, and request context
* fix(hopper): retain health at the actual provider lifecycle boundary
* test(hopper): distinguish socket loss from later observed process exit
* test(hopper): cover observed exit separately from socket-first replies
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Co-authored-by: N0zoM1z0 <1705004398@qq.com>
