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fix/6116-javascript-application-fs-errors
rea/docs/verification/javascript-retained-facts-2026-10-15.json
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YsopwnableandKaoru0822 d9d085a15e feat(javascript): query retained application facts by exact path (#4265) 
Expose exact-path, selected-property, paged reads of retained JavaScript application facts through the shared CLI/MCP analysis view. Preserve original identities, complete row Evidence and partial coverage; retain reproducible real-Joplin and actual-agent measurements, including negative cost results.

Fixes #4190. Part of #4027. Code mode remains deferred by #4091.

Integrate main after #4274. Validation: 114 distinct focused cases across documented invocations, 106 Python cases, full static/docs checks and 18 version-labelled real-application workflows with 9 complete CLI/MCP view parity controls. Preserve two local fixture deadline failures and the unchanged test passing on an available single CPU. Final-head CI passed all 36 jobs after one Windows timeout retry without source changes; both exact-head automated reviews are clear and all review threads resolved. Downloadable apps and raw large Evidence/transcripts are excluded.

Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
2026-10-16 12:46:53 +08:00

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{
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},
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},
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},
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}
}
},
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},
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}
}
],
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{
"name": "direct-export",
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"arm": "export",
"requested_model": "gpt-5.6-terra",
"reasoning": "high",
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],
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}
],
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"sha256": null,
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"runtime_execution": "unknown",
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},
"package": {
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"version": null
},
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"semantic": "unknown"
},
"limitations": [
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]
},
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},
"conditions": "Actual Codex CLI, fresh process/MCP, same current backend and caller question. Normal existing auth; --ignore-user-config, no HOME/CODEX_HOME mutation or credential copy. Export/local-shell baseline and candidate share both existing tools; candidate additionally allows inspect_analysis_view. Code-mode host, apps/plugins, skills discovery and other agents disabled in both. Workspace-write sandbox. Requested alias is not proof of underlying model identity. Source hashing/model billing unmeasured here; external observer supplies whole process-family costs. Regenerable exports removed with workspace.",
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},
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},
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},
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}
}
},
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}
},
{
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"arm": "export",
"requested_model": "gpt-5.6-terra",
"reasoning": "high",
"harness_sha256": "a2c85bcfa820261a020124f3b54b649a3dd5bf4a68adb591add0abd7905e29e4",
"cli_version": "0.161.0",
"enabled_tools": [
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"export_evidence_bundle"
],
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"prompt": "Investigate the real shipped Joplin v3.7.21 ASAR at /tmp/rea-native-handoff-20261015/cases/available/app.asar using the configured REA MCP server. Preserve this caller-selected source_paths array exactly: [\"ElectronAppWrapper.js\",\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"]. Use detail summary for preparation. Do not execute or modify the application, download anything, inspect the REA repository, read raw ASAR bytes through shell tools, or start other agents. Local shell/programming is allowed only to inspect/project a retained Evidence export in your workspace, not to bypass the analysis backend. Return facts supported by actual tools and cite the actual parent/observation IDs. Runtime execution must not be inferred merely from static metadata. Stop when the question is answered.\nUse the normal analysis deadline. For these exact metadata/native paths [\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"], report package name/version, keytar's observed byte identity and whether there is runtime execution evidence, and any unavailable processing phases for the three metadata paths (source map, HTML, package.json). Report the original application/semantic source coverage. Do not equate an exhausted selected page with globally complete analysis.",
"prompt_sha256": "eb3ff189ad596883b80464c6b21f7e4baf801ae5028f08c2e3c501c9a92d97f4",
"elapsed_ms": 332429.169893,
"exit_code": 0,
"usage": [
{
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"cached_input_tokens": 675072,
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"output_tokens": 5208,
"reasoning_output_tokens": 2093
}
],
"answer": {
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"native": {
"path": "node_modules/keytar/build/Release/keytar.node",
"node_id": "jag_node_98ccdef0e85d67cba9cc843193c5ba877f0a73ba3fa7d3581f6db0396a707b2d",
"sha256": "0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a",
"observed_byte_identity": true,
"runtime_execution": "unknown",
"observation_ids": [
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]
},
"package": {
"name": "@joplin/app-desktop",
"version": "3.7.21"
},
"processing_gaps": [],
"source_coverage": {
"application": "partial; not truncated; 5,343 application unknowns",
"semantic": "partial; not truncated; 41,161 semantic unknowns"
},
"limitations": [
"Caller-selected paths were preserved exactly; 5,345 other inventoried files were outside the selected analysis scope.",
"No unavailable processing-phase observation was recorded for ElectronAppWrapper.js.map, index.html, or package.json. Source-map parsing was observed, but its mapped ElectronAppWrapper.ts content was unavailable (observation jag_observation_00ca12c3f7c0e9a79b823fbcd0a5cf7a559a54a713ad50729bdf1e3771fcf528).",
"Package identity was observed by parsing package.json (observation jag_observation_045ddc78e14d884381aea770d394990975c497e6c3fb77f26f58c531b8600464).",
"There is no runtime-execution evidence for keytar: the analysis was static and explicitly does not establish runtime execution. The exhausted summary page was not treated as globally complete analysis."
]
},
"failures": [],
"event_types": {
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"item.completed": 22,
"turn.started": 1,
"item.started": 17,
"turn.completed": 1
},
"conditions": "Actual Codex CLI, fresh process/MCP, same current backend and caller question. Normal existing auth; --ignore-user-config, no HOME/CODEX_HOME mutation or credential copy. Export/local-shell baseline and candidate share both existing tools; candidate additionally allows inspect_analysis_view. Client code-mode host remains enabled because this installed Codex requires it for all tool dispatch; the experimental code_mode and code_mode_only features remain disabled. Apps/plugins, skills discovery and other agents disabled in both. Workspace-write sandbox. Requested alias is not proof of underlying model identity. Source hashing/model billing unmeasured here; external observer supplies whole process-family costs. Regenerable exports removed with workspace.",
"actual_operation_count": 17,
"mcp_call_count": 2,
"failed_command_count": 3,
"expected_partial_error_count": 0,
"operations": [
{
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"input_path": "/tmp/rea-native-handoff-20261015/cases/available/app.asar",
"format": "asar",
"detail": "summary",
"source_paths": [
"ElectronAppWrapper.js",
"ElectronAppWrapper.js.map",
"index.html",
"package.json",
"node_modules/keytar/build/Release/keytar.node"
]
},
"status": "completed"
},
{
"type": "mcp_tool_call",
"tool": "export_evidence_bundle",
"arguments": {
"path": "/tmp/rea-facts-agent-Q7kN1t/rea-evidence.json"
},
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"file rea-evidence.json && rg -n -m 8 'keytar|package\\\\.json|ElectronAppWrapper\\\\.js\\\\.map|\\\"phase\\\"|source map' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '{record_ids:[.records[].evidence_id], node_kind:(.records[0].normalized_result.graph.nodes|type), node_count:(.records[0].normalized_result.graph.nodes|length), semantic_kind:(.records[0].normalized_result.semantic_graph|type), semantic_keys:(.records[0].normalized_result.semantic_graph|keys)}' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph.nodes[] | select((.properties.path? // .path? // \\\"\\\") | IN(\\\"ElectronAppWrapper.js.map\\\";\\\"index.html\\\";\\\"package.json\\\";\\\"node_modules/keytar/build/Release/keytar.node\\\"))' rea-evidence.json\"",
"exit_code": 3,
"status": "failed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph.nodes[] | select((.properties.path? // .path? // \\\"\\\") as \"'$p | [\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"] | index($p))'\"' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph.nodes[] | select(tostring | contains(\\\"node_modules/keytar/build/Release/keytar.node\\\"))' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph.edges[] | select(.source_node_id==\\\"jag_node_98ccdef0e85d67cba9cc843193c5ba877f0a73ba3fa7d3581f6db0396a707b2d\\\" or .target_node_id==\\\"jag_node_98ccdef0e85d67cba9cc843193c5ba877f0a73ba3fa7d3581f6db0396a707b2d\\\" or (tostring|contains(\\\"node_modules/keytar/build/Release/keytar.node\\\")))' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph.nodes[] | select(tostring | contains(\\\"\\\\\\\"package.json\\\\\\\"\\\"))' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph.nodes[] | select(tostring | test(\\\"\\\\\\\\\\\\\\\"(ElectronAppWrapper\\\\\\\\.js\\\\\\\\.map|index\\\\\\\\.html|package\\\\\\\\.json)\\\\\\\\\\\\\\\"\\\"))' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph.nodes[] | select(.kind | test(\\\"unavailable|unknown\\\";\\\"i\\\"))' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph.nodes[] | select(any(.observations[]; (.properties.path? // \\\"\\\") as \"'$p | [\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\"] | index($p)) and any(.observations[]; .evidence.state==\"unavailable\")) | {node_id,kind,observations:[.observations[] | select(.evidence.state==\"unavailable\") | {observation_id,label,properties,evidence:{authority:.evidence.authority,confidence:.evidence.confidence,state:.evidence.state,extractor:.evidence.extractor,limitations:.evidence.limitations}}]}'\"' rea-evidence.json\"",
"exit_code": 3,
"status": "failed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph.nodes[] | select(any(.observations[]; ((.properties.path? // \\\"\\\") as \"'$p | ([\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\"] | index($p)))) and any(.observations[]; .evidence.state==\"unavailable\")) | {node_id:.node_id,kind:.kind,observations:[.observations[] | select(.evidence.state==\"unavailable\") | {observation_id:.observation_id,label:.label,properties:.properties,evidence:{authority:.evidence.authority,confidence:.evidence.confidence,state:.evidence.state,extractor:.evidence.extractor,limitations:.evidence.limitations}}]}'\"' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '{semantic_nodes:(.records[0].normalized_result.semantic_graph.nodes|length), contexts:(.records[0].normalized_result.semantic_graph.evidence_contexts|type), context_count:(.records[0].normalized_result.semantic_graph.evidence_contexts|length), unknowns:(.records[0].normalized_result.semantic_graph.unknowns|length)}' rea-evidence.json && jq -c '.records[0].normalized_result.semantic_graph.evidence_contexts[] | select(tostring | contains(\\\"ElectronAppWrapper.js.map\\\") or tostring | contains(\\\"index.html\\\") or tostring | contains(\\\"package.json\\\"))' rea-evidence.json\"",
"exit_code": 5,
"status": "failed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.semantic_graph.evidence_contexts[] | select((tostring | contains(\\\"ElectronAppWrapper.js.map\\\")) or (tostring | contains(\\\"index.html\\\")) or (tostring | contains(\\\"package.json\\\")))' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '.records[0].normalized_result.semantic_graph.evidence_contexts[0]' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph.edges[] | select((.properties.path? // \\\"\\\") as \"'$p | [\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\"] | index($p)) | {edge_id,relation,properties,evidence}'\"' rea-evidence.json\"",
"exit_code": 0,
"status": "completed"
}
],
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"observed_parent_evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9",
"trial_sha256": "420944a1d9c79c57c0b82b3f6a3c379c0c7ed6da8a03028f4124bcfc5f96712e",
"events_sha256": "8a17d7954dd6d107a0f745b7aac062aee0961e107f70fd7a50c281c2d2e37e61",
"grade": "Core facts correct; normal metadata processing_gaps empty, global coverage partial, runtime execution unknown. Exact citation ownership is checked separately; a physical-byte citation is present."
},
"resources": {
"resource_scope": "rea-efficiency-8b515db7c8c04e3b8b6ac67307011dbb.scope",
"peak_cgroup_bytes_sampled": 1749917696,
"elapsed_seconds": 332.921,
"abort": null,
"hard_memory_bytes": 8589934592,
"early_stop_bytes": 6442450944,
"cpu_quota_percent": 100,
"cpu_affinity": [15],
"task_ceiling": 192,
"peak_tasks_sampled": 83,
"resource_events_last_observed": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
},
"resource_events_final": null,
"resource_counters_verified": false,
"cpu_stat_last_observed": {
"usage_usec": 141006390,
"user_usec": 118139846,
"system_usec": 22866544,
"nr_periods": 3328,
"nr_throttled": 57,
"throttled_usec": 93783,
"nr_bursts": 0,
"burst_usec": 0
},
"payload_resource_observation": {
"phase": "payload-exited-observer-alive",
"ownership_token": "rea-efficiency-8b515db7c8c04e3b8b6ac67307011dbb.scope",
"payload_exit_code": 0,
"observer_pid": 3087010,
"remaining_processes": [3087010],
"payload_cleanup_verified": true,
"cpu_stat": {
"usage_usec": 141004989,
"user_usec": 118138672,
"system_usec": 22866316,
"nr_periods": 3327,
"nr_throttled": 57,
"throttled_usec": 93783,
"nr_bursts": 0,
"burst_usec": 0
},
"memory_peak_bytes": 1750212608,
"control_group": "user.slice/user-1004.slice/user@1004.service/app.slice/rea-efficiency-8b515db7c8c04e3b8b6ac67307011dbb.scope",
"resource_events": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
}
},
"payload_resource_observation_verified": true,
"payload_observation_scope": "Counters at payload exit while observer remains alive; not final whole-scope counters.",
"payload_observer_sources_sha256": {
"resource-run.py": "7728862171415e7dee2c11af2ead2b9a54265fccaf82a7113956d36b29065e33",
"resource_payload.py": "6f089e645459eba80c5d73e39c21606c78173a44daf49fabc3b88c4631ce51c6"
}
}
},
{
"name": "direct-view-host",
"version": "v1",
"result": {
"task": "direct",
"arm": "view",
"requested_model": "gpt-5.6-terra",
"reasoning": "high",
"harness_sha256": "a2c85bcfa820261a020124f3b54b649a3dd5bf4a68adb591add0abd7905e29e4",
"cli_version": "0.161.0",
"enabled_tools": [
"analyze_javascript_application",
"export_evidence_bundle",
"inspect_analysis_view"
],
"code_mode_host": true,
"prompt": "Investigate the real shipped Joplin v3.7.21 ASAR at /tmp/rea-native-handoff-20261015/cases/available/app.asar using the configured REA MCP server. Preserve this caller-selected source_paths array exactly: [\"ElectronAppWrapper.js\",\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"]. Use detail summary for preparation. Do not execute or modify the application, download anything, inspect the REA repository, read raw ASAR bytes through shell tools, or start other agents. Local shell/programming is allowed only to inspect/project a retained Evidence export in your workspace, not to bypass the analysis backend. Return facts supported by actual tools and cite the actual parent/observation IDs. Runtime execution must not be inferred merely from static metadata. Stop when the question is answered.\nUse the normal analysis deadline. For these exact metadata/native paths [\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"], report package name/version, keytar's observed byte identity and whether there is runtime execution evidence, and any unavailable processing phases for the three metadata paths (source map, HTML, package.json). Report the original application/semantic source coverage. Do not equate an exhausted selected page with globally complete analysis.",
"prompt_sha256": "eb3ff189ad596883b80464c6b21f7e4baf801ae5028f08c2e3c501c9a92d97f4",
"elapsed_ms": 181661.884088,
"exit_code": 0,
"usage": [
{
"input_tokens": 405267,
"cached_input_tokens": 353024,
"cache_write_input_tokens": 0,
"output_tokens": 4412,
"reasoning_output_tokens": 2189
}
],
"answer": {
"parent_evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9",
"native": {
"path": "node_modules/keytar/build/Release/keytar.node",
"node_id": "jag_node_98ccdef0e85d67cba9cc843193c5ba877f0a73ba3fa7d3581f6db0396a707b2d",
"sha256": "0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a",
"observed_byte_identity": true,
"runtime_execution": "unknown",
"observation_ids": [
"jag_observation_d7fbf97718fa986435ef951cf11b73f63610f59facd1b40c22fc9f06876d54bc",
"jag_observation_a115f987aff7345bfcdb4b58b33b30e084e0a91b6adaf0b995f0e03717161be4"
]
},
"package": {
"name": "@joplin/app-desktop",
"version": "3.7.21"
},
"processing_gaps": [
{
"path": "ElectronAppWrapper.js.map",
"operation": "parse-local-source-map / original-source content",
"analysis_status": "original ElectronAppWrapper.ts content unavailable (content_available=false); source-map parsing itself completed",
"authority": "artifact-bytes",
"state": "observed",
"confidence": "exact",
"observation_id": "jag_observation_00ca12c3f7c0e9a79b823fbcd0a5cf7a559a54a713ad50729bdf1e3771fcf528"
}
],
"source_coverage": {
"application": "partial; 5,345 inventoried files were outside the caller-selected source scope; 5,343 application unknowns.",
"semantic": "partial; 41,161 semantic unknowns. No truncation was reported."
},
"limitations": [
"Package fact: node jag_node_e8bdf8c351dbabfcf9569d0f5d906da6733513f150a75c28e20ec408fe57f1fc, observation jag_observation_045ddc78e14d884381aea770d394990975c497e6c3fb77f26f58c531b8600464, artifact-byte observed/exact.",
"No runtime execution evidence was observed for keytar. The analysis was static and explicitly did not execute bundle/bootstrap code; static metadata or relationships do not prove execution.",
"For the other requested metadata paths, retained observations show index.html included (jag_observation_9d2885dce4934a039954ad67bd87c13500dfa4291563bde2ee451e097094f4da) and ElectronAppWrapper.js.map included/parsed (jag_observation_ce27d9137ab2809150c4b8f46ca98f595dea528aca8550b63067dd836f73c515). No further unavailable processing phase is recorded for index.html or package.json.",
"The summary view was exhausted only within that selected view (3,294 of 15,755 facts); this does not establish global completeness."
]
},
"failures": [],
"event_types": {
"thread.started": 1,
"item.completed": 14,
"turn.started": 1,
"item.started": 10,
"turn.completed": 1
},
"conditions": "Actual Codex CLI, fresh process/MCP, same current backend and caller question. Normal existing auth; --ignore-user-config, no HOME/CODEX_HOME mutation or credential copy. Export/local-shell baseline and candidate share both existing tools; candidate additionally allows inspect_analysis_view. Client code-mode host remains enabled because this installed Codex requires it for all tool dispatch; the experimental code_mode and code_mode_only features remain disabled. Apps/plugins, skills discovery and other agents disabled in both. Workspace-write sandbox. Requested alias is not proof of underlying model identity. Source hashing/model billing unmeasured here; external observer supplies whole process-family costs. Regenerable exports removed with workspace.",
"actual_operation_count": 10,
"mcp_call_count": 3,
"failed_command_count": 0,
"expected_partial_error_count": 0,
"operations": [
{
"type": "mcp_tool_call",
"tool": "analyze_javascript_application",
"arguments": {
"input_path": "/tmp/rea-native-handoff-20261015/cases/available/app.asar",
"format": "asar",
"detail": "summary",
"source_paths": [
"ElectronAppWrapper.js",
"ElectronAppWrapper.js.map",
"index.html",
"package.json",
"node_modules/keytar/build/Release/keytar.node"
]
},
"status": "completed"
},
{
"type": "mcp_tool_call",
"tool": "inspect_analysis_view",
"arguments": {
"source": {
"kind": "retained-evidence",
"evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9"
},
"view": {
"kind": "javascript-facts",
"where": {
"paths": [
"ElectronAppWrapper.js.map",
"index.html",
"package.json",
"node_modules/keytar/build/Release/keytar.node"
]
},
"property_keys": [
"name",
"version",
"sha256",
"byte_identity",
"observed_byte_identity",
"runtime_execution",
"operation",
"analysis_status"
],
"offset": 0,
"limit": 64
}
},
"status": "completed"
},
{
"type": "mcp_tool_call",
"tool": "export_evidence_bundle",
"arguments": {
"path": "/tmp/rea-facts-agent-ls8K1f/joplin-3.7.21-evidence.json",
"overwrite": false
},
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"file joplin-3.7.21-evidence.json && jq -r 'keys[]' joplin-3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -r '.records | to_entries[] | [.key, .value.evidence_id, .value.operation, (.value.normalized_result.kind // \\\"\\\")] | @tsv' joplin-3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -r '.records[1].normalized_result | keys[]' joplin-3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[1].normalized_result.graph.nodes[] | select(any(.evidence.location.value?; .kind == \\\"artifact-path\\\" and (.path == \\\"ElectronAppWrapper.js.map\\\" or .path == \\\"index.html\\\" or .path == \\\"package.json\\\" or .path == \\\"node_modules/keytar/build/Release/keytar.node\\\"))) | {node_id,kind,identity,observation_id,properties,evidence:{authority:.evidence.authority,state:.evidence.state,confidence:.evidence.confidence,extractor:.evidence.extractor,coverage:.evidence.coverage,limitations:.evidence.limitations,location:.evidence.location}}' joplin-3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[1].normalized_result.graph.nodes[0]' joplin-3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[1].normalized_result.graph.nodes[] | . as \"'$n | .observations[] | select(.evidence.location.value.path? == \"ElectronAppWrapper.js.map\" or .evidence.location.value.path? == \"index.html\" or .evidence.location.value.path? == \"package.json\" or .evidence.location.value.path? == \"node_modules/keytar/build/Release/keytar.node\") | {node_id:$n.node_id,kind:$n.kind,identity:$n.identity,observation_id,properties,evidence:{authority:.evidence.authority,state:.evidence.state,confidence:.evidence.confidence,extractor:.evidence.extractor,coverage:.evidence.coverage,limitations:.evidence.limitations,location:.evidence.location}}'\"' joplin-3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -r '.. | objects | keys[]' joplin-3.7.21-evidence.json | sort -u | rg 'status|analysis|phase|process|native|runtime|unavailable'\"",
"exit_code": 0,
"status": "completed"
}
],
"other_completed_items": [],
"observed_parent_evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9",
"trial_sha256": "81f6fb7f7985ed148390ffce360f9331393a5b6d95c87fa9bc98b7853480fa1b",
"events_sha256": "47e3ac801fc6ff9dfc150a258d48a9c883247e3e8aaf44549f76100838678442",
"grade": "Core facts correct; qualified phase answer: a true missing original-source-content fact is mixed into processing_gaps while acknowledging map parsing completed. Composite operation/status are not literal processing fields. Extra ASAR-entry observation is traceable but not owned by the cited native node."
},
"resources": {
"resource_scope": "rea-efficiency-01b8ab4ff9af4aa39ab0fc098f507474.scope",
"peak_cgroup_bytes_sampled": 1976688640,
"elapsed_seconds": 182.183,
"abort": null,
"hard_memory_bytes": 8589934592,
"early_stop_bytes": 6442450944,
"cpu_quota_percent": 100,
"cpu_affinity": [15],
"task_ceiling": 192,
"peak_tasks_sampled": 92,
"resource_events_last_observed": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
},
"resource_events_final": null,
"resource_counters_verified": false,
"cpu_stat_last_observed": {
"usage_usec": 58728247,
"user_usec": 49916856,
"system_usec": 8811391,
"nr_periods": 1821,
"nr_throttled": 62,
"throttled_usec": 69416,
"nr_bursts": 0,
"burst_usec": 0
},
"payload_resource_observation": {
"phase": "payload-exited-observer-alive",
"ownership_token": "rea-efficiency-01b8ab4ff9af4aa39ab0fc098f507474.scope",
"payload_exit_code": 0,
"observer_pid": 3088110,
"remaining_processes": [3088110],
"payload_cleanup_verified": true,
"cpu_stat": {
"usage_usec": 58726775,
"user_usec": 49915383,
"system_usec": 8811391,
"nr_periods": 1820,
"nr_throttled": 62,
"throttled_usec": 69416,
"nr_bursts": 0,
"burst_usec": 0
},
"memory_peak_bytes": 1976950784,
"control_group": "user.slice/user-1004.slice/user@1004.service/app.slice/rea-efficiency-01b8ab4ff9af4aa39ab0fc098f507474.scope",
"resource_events": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
}
},
"payload_resource_observation_verified": true,
"payload_observation_scope": "Counters at payload exit while observer remains alive; not final whole-scope counters.",
"payload_observer_sources_sha256": {
"resource-run.py": "7728862171415e7dee2c11af2ead2b9a54265fccaf82a7113956d36b29065e33",
"resource_payload.py": "6f089e645459eba80c5d73e39c21606c78173a44daf49fabc3b88c4631ce51c6"
}
}
},
{
"name": "direct-view-discovery",
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"result": {
"task": "direct",
"arm": "view",
"requested_model": "gpt-5.6-terra",
"reasoning": "high",
"harness_sha256": "43a4d59016c1fec1a9a2957c9b32c32fb8a91e77311c2813f05fdf89ae388fca",
"cli_version": "0.161.0",
"enabled_tools": [
"analyze_javascript_application",
"export_evidence_bundle",
"inspect_analysis_view"
],
"code_mode_host": true,
"prompt": "Investigate the real shipped Joplin v3.7.21 ASAR at /tmp/rea-native-handoff-20261015/cases/available/app.asar using the configured REA MCP server. Preserve this caller-selected source_paths array exactly: [\"ElectronAppWrapper.js\",\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"]. Use detail summary for preparation. Do not execute or modify the application, download anything, inspect the REA repository, read raw ASAR bytes through shell tools, or start other agents. Local shell/programming is allowed only to inspect/project a retained Evidence export in your workspace, not to bypass the analysis backend. Return facts supported by actual tools and cite the actual parent/observation IDs. Runtime execution must not be inferred merely from static metadata. Stop when the question is answered.\nUse the normal analysis deadline. For these exact metadata/native paths [\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"], report package name/version, keytar's observed byte identity and whether there is runtime execution evidence, and any unavailable processing phases for the three metadata paths (source map, HTML, package.json). Report the original application/semantic source coverage. Do not equate an exhausted selected page with globally complete analysis.",
"prompt_sha256": "eb3ff189ad596883b80464c6b21f7e4baf801ae5028f08c2e3c501c9a92d97f4",
"elapsed_ms": 342708.268515,
"exit_code": 0,
"usage": [
{
"input_tokens": 835185,
"cached_input_tokens": 766464,
"cache_write_input_tokens": 0,
"output_tokens": 6278,
"reasoning_output_tokens": 2368
}
],
"other_completed_items": [
{
"id": "item_0",
"type": "error",
"message": "Under-development features enabled: skip_host_skill_discovery. Under-development features are incomplete and may behave unpredictably. To suppress this warning, set `suppress_unstable_features_warning = true` in /home/yann/.codex/config.toml."
}
],
"answer": {
"parent_evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9",
"native": {
"path": "node_modules/keytar/build/Release/keytar.node",
"node_id": "jag_node_98ccdef0e85d67cba9cc843193c5ba877f0a73ba3fa7d3581f6db0396a707b2d",
"sha256": "0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a",
"observed_byte_identity": true,
"runtime_execution": "unknown",
"observation_ids": [
"jag_observation_d7fbf97718fa986435ef951cf11b73f63610f59facd1b40c22fc9f06876d54bc",
"jag_observation_a115f987aff7345bfcdb4b58b33b30e084e0a91b6adaf0b995f0e03717161be4"
]
},
"package": {
"name": "@joplin/app-desktop",
"version": "3.7.21"
},
"processing_gaps": [],
"source_coverage": {
"application": "partial (not truncated; 5,343 application unknowns)",
"semantic": "partial (not truncated; 41,161 semantic unknowns)"
},
"limitations": [
"Package identity is an observed package.json parse: jag_observation_045ddc78e14d884381aea770d394990975c497e6c3fb77f26f58c531b8600464. Native byte identity is observed artifact-byte evidence, not a runtime observation.",
"No processing-phase observation with state \"unavailable\" was retained for the exact metadata paths ElectronAppWrapper.js.map, index.html, or package.json. Separately, the observed source-map parsing record says its referenced original ElectronAppWrapper.ts content is unavailable (content_available:false): jag_observation_00ca12c3f7c0e9a79b823fbcd0a5cf7a559a54a713ad50729bdf1e3771fcf528.",
"The HTML and package inventory observations are jag_observation_9d2885dce4934a039954ad67bd87c13500dfa4291563bde2ee451e097094f4da and jag_observation_95fd55b5c1b869dc864fa7cb6cd8ffd4daf4f39e4b212b884a473672a870f3c2; the source-map inventory observation is jag_observation_ce27d9137ab2809150c4b8f46ca98f595dea528aca8550b63067dd836f73c515.",
"REA parsed JavaScript/HTML inertly and did not execute bundle bootstrap code. Therefore no runtime execution evidence for keytar was observed; its runtime status remains unknown.",
"The selected source_paths were preserved exactly. They left 5,345 inventoried files outside source analysis. The summary view being exhausted applies only to that view and does not establish globally complete analysis."
]
},
"failures": [],
"event_types": {
"thread.started": 1,
"item.completed": 24,
"turn.started": 1,
"item.started": 17,
"turn.completed": 1
},
"conditions": "Actual Codex CLI, fresh process/MCP, same current backend and caller question. Normal existing auth; --ignore-user-config, no HOME/CODEX_HOME mutation or credential copy. Export/local-shell baseline and candidate share both existing tools; candidate additionally allows inspect_analysis_view. Client code-mode host remains enabled because this installed Codex requires it for all tool dispatch; the experimental code_mode and code_mode_only features remain disabled. Apps/plugins, skills discovery and other agents disabled in both. Workspace-write sandbox. Requested alias is not proof of underlying model identity. Source hashing/model billing unmeasured here; external observer supplies whole process-family costs. Regenerable exports removed with workspace.",
"actual_operation_count": 17,
"mcp_call_count": 4,
"failed_command_count": 0,
"expected_partial_error_count": 0,
"operations": [
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"tool": "analyze_javascript_application",
"arguments": {
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"format": "asar",
"detail": "summary",
"source_paths": [
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"ElectronAppWrapper.js.map",
"index.html",
"package.json",
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]
},
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},
{
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"arguments": {
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},
"view": {
"kind": "javascript-facts",
"where": {
"paths": [
"ElectronAppWrapper.js.map",
"index.html",
"package.json",
"node_modules/keytar/build/Release/keytar.node"
]
},
"property_keys": [],
"include_available_property_keys": true,
"offset": 0,
"limit": 64
}
},
"status": "completed"
},
{
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},
"view": {
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"where": {
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"index.html",
"package.json",
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},
"property_keys": [
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"analysis_status",
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"bytes",
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"offset": 0,
"limit": 64
}
},
"status": "completed"
},
{
"type": "mcp_tool_call",
"tool": "export_evidence_bundle",
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"overwrite": true
},
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq 'keys' joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
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"command": "/bin/bash -lc \"jq '.records | map({evidence_id,operation,predicate_type,normalized_type:(.normalized_result|type),keys:(.normalized_result|keys_unsorted)})' joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
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"exit_code": 0,
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},
{
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{
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},
{
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"exit_code": 0,
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},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '.records[] | select(.evidence_id==\\\"ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9\\\") | .normalized_result.semantic_graph | keys' joplin-v3.7.21-evidence.json\"",
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{
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},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -r '.. | strings | select(test(\\\"unavailable\\\"; \\\"i\\\"))' joplin-v3.7.21-evidence.json | sort -u\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[] | select(.evidence_id==\\\"ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9\\\") | .normalized_result.graph.nodes[] as \"'$n | $n.observations[] | select(.evidence.location.available and (.evidence.location.value.path? == \"ElectronAppWrapper.js.map\" or .evidence.location.value.path? == \"index.html\" or .evidence.location.value.path? == \"package.json\" or .evidence.location.value.path? == \"node_modules/keytar/build/Release/keytar.node\")) | {node_id:$n.node_id,kind:$n.kind,observation_id,props:.properties,operation:.evidence.extractor.operation,state:.evidence.state,authority:.evidence.authority,confidence:.evidence.confidence,limitations:.evidence.limitations}'\"' joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[] | select(.evidence_id==\\\"ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9\\\") | .normalized_result.semantic_graph.unknowns[] | select((tostring|test(\\\"ElectronAppWrapper\\\\\\\\.js\\\\\\\\.map|index\\\\\\\\.html|package\\\\\\\\.json\\\")))' joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
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},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[] | select(.evidence_id==\\\"ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9\\\") | .normalized_result.graph.nodes[] as \"'$n | $n.observations[] | select(.properties.analysis_status? != null or .properties.operation? != null) | {node_id:$n.node_id,kind:$n.kind,observation_id,properties:.properties,evidence:.evidence}'\"' joplin-v3.7.21-evidence.json | head -c 12000\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[] | select(.evidence_id==\\\"ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9\\\") | .normalized_result.graph.nodes[] as \"'$n | $n.observations[] | select(.evidence.state==\"unavailable\" and (.properties.path==\"ElectronAppWrapper.js.map\" or .properties.path==\"index.html\" or .properties.path==\"package.json\")) | {node_id:$n.node_id,kind:$n.kind,observation_id,properties:.properties,evidence:{authority:.evidence.authority,state:.evidence.state,confidence:.evidence.confidence,extractor:.evidence.extractor,location:.evidence.location}}'\"' joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
}
],
"observed_parent_evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9",
"trial_sha256": "8d5b30057ebf8fea10a2bc4b755fc8c37b107a90f419072402ac57eb5c36661a",
"events_sha256": "f1216bc8a45ef55612190afeb758b64704c2f1735c880e05f49a7877f24da2b8",
"grade": "Core facts correct; normal metadata processing_gaps empty, global coverage partial, runtime execution unknown. Exact citation ownership is checked separately; a physical-byte citation is present."
},
"resources": {
"resource_scope": "rea-efficiency-74444624428845659ce3dc4114549e10.scope",
"peak_cgroup_bytes_sampled": 1808236544,
"elapsed_seconds": 343.08,
"abort": null,
"hard_memory_bytes": 8589934592,
"early_stop_bytes": 6442450944,
"cpu_quota_percent": 100,
"cpu_affinity": [15],
"task_ceiling": 192,
"peak_tasks_sampled": 101,
"resource_events_last_observed": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
},
"resource_events_final": null,
"resource_counters_verified": false,
"cpu_stat_last_observed": {
"usage_usec": 151272893,
"user_usec": 129107045,
"system_usec": 22165847,
"nr_periods": 3430,
"nr_throttled": 73,
"throttled_usec": 116551,
"nr_bursts": 0,
"burst_usec": 0
},
"payload_resource_observation": {
"phase": "payload-exited-observer-alive",
"ownership_token": "rea-efficiency-74444624428845659ce3dc4114549e10.scope",
"payload_exit_code": 0,
"observer_pid": 3096541,
"remaining_processes": [3096541],
"payload_cleanup_verified": true,
"cpu_stat": {
"usage_usec": 151271793,
"user_usec": 129106107,
"system_usec": 22165686,
"nr_periods": 3430,
"nr_throttled": 73,
"throttled_usec": 116551,
"nr_bursts": 0,
"burst_usec": 0
},
"memory_peak_bytes": 1808695296,
"control_group": "user.slice/user-1004.slice/user@1004.service/app.slice/rea-efficiency-74444624428845659ce3dc4114549e10.scope",
"resource_events": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
}
},
"payload_resource_observation_verified": true,
"payload_observation_scope": "Counters at payload exit while observer remains alive; not final whole-scope counters.",
"payload_observer_sources_sha256": {
"resource-run.py": "7728862171415e7dee2c11af2ead2b9a54265fccaf82a7113956d36b29065e33",
"resource_payload.py": "6f089e645459eba80c5d73e39c21606c78173a44daf49fabc3b88c4631ce51c6"
}
}
},
{
"name": "partial-export",
"version": "v2",
"result": {
"task": "partial",
"arm": "export",
"requested_model": "gpt-5.6-terra",
"reasoning": "high",
"harness_sha256": "43a4d59016c1fec1a9a2957c9b32c32fb8a91e77311c2813f05fdf89ae388fca",
"cli_version": "0.161.0",
"enabled_tools": [
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],
"code_mode_host": true,
"prompt": "Investigate the real shipped Joplin v3.7.21 ASAR at /tmp/rea-native-handoff-20261015/cases/available/app.asar using the configured REA MCP server. Preserve this caller-selected source_paths array exactly: [\"ElectronAppWrapper.js\",\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"]. Use detail summary for preparation. Do not execute or modify the application, download anything, inspect the REA repository, read raw ASAR bytes through shell tools, or start other agents. Local shell/programming is allowed only to inspect/project a retained Evidence export in your workspace, not to bypass the analysis backend. Return facts supported by actual tools and cite the actual parent/observation IDs. Runtime execution must not be inferred merely from static metadata. Stop when the question is answered.\nUse analysis_timeout_ms:1 exactly, deliberately producing a partial observation; do not retry with a longer deadline or broader source selection. Assess what remains usable after interruption for [\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"]. Report the exact native byte identity and execution-evidence status, and each unavailable processing operation for the three metadata paths, with its actual phase-entry status, authority/state/confidence and observation ID. Package fields may be null when not analyzed. Keep global application/semantic coverage explicit.",
"prompt_sha256": "74948c6a86a5d8a222e7c68cd1c281e0ae9da159294f74369778ce5d9b838afc",
"elapsed_ms": 169887.212197,
"exit_code": 0,
"usage": [
{
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"cached_input_tokens": 346624,
"cache_write_input_tokens": 0,
"output_tokens": 3803,
"reasoning_output_tokens": 1262
}
],
"other_completed_items": [
{
"id": "item_0",
"type": "error",
"message": "Under-development features enabled: skip_host_skill_discovery. Under-development features are incomplete and may behave unpredictably. To suppress this warning, set `suppress_unstable_features_warning = true` in /home/yann/.codex/config.toml."
}
],
"answer": {
"parent_evidence_id": "ev_50a8dc024495aa3c318f3baa0c3433c90e0f72827eafccf9704bd5382b4de28f",
"native": {
"path": "node_modules/keytar/build/Release/keytar.node",
"node_id": "jag_node_98ccdef0e85d67cba9cc843193c5ba877f0a73ba3fa7d3581f6db0396a707b2d",
"sha256": "0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a",
"observed_byte_identity": true,
"runtime_execution": "unknown",
"observation_ids": [
"jag_observation_d7fbf97718fa986435ef951cf11b73f63610f59facd1b40c22fc9f06876d54bc",
"jag_observation_a115f987aff7345bfcdb4b58b33b30e084e0a91b6adaf0b995f0e03717161be4"
]
},
"package": {
"name": null,
"version": null
},
"processing_gaps": [
{
"path": "ElectronAppWrapper.js.map",
"operation": "parse-local-source-map",
"analysis_status": "not-started",
"authority": "artifact-bytes",
"state": "unavailable",
"confidence": "unknown",
"observation_id": "jag_observation_4b04b2982325de96322efd493507386b986aca57309e959870831dbd6dffd4fd"
},
{
"path": "index.html",
"operation": "parse-html-script-references",
"analysis_status": "not-started",
"authority": "artifact-bytes",
"state": "unavailable",
"confidence": "unknown",
"observation_id": "jag_observation_f432dffb800852a9d28d2f85c17ae6b5d83b7b2ae5780021169506a8d08f0d35"
},
{
"path": "package.json",
"operation": "parse-package-json",
"analysis_status": "not-started",
"authority": "artifact-bytes",
"state": "unavailable",
"confidence": "unknown",
"observation_id": "jag_observation_5dae4759fcf36b25470467347515c95207d69d7ececfc17a1d90ecfbbea4dc79"
}
],
"source_coverage": {
"application": "partial, not truncated; the 1 ms timeout interrupted ElectronAppWrapper.js, with 0 modules parsed and 0 findings. Complete inventory identity remains retained; 5,345 inventoried files were outside the caller-selected scope.",
"semantic": "partial and truncated; every semantic family retained 0 relations, with the 1 ms worker-timeout limit."
},
"limitations": [
"The retained observation used exactly the caller-selected source_paths and analysis_timeout_ms: 1.",
"The native addon was inventory-observed as unpacked, 76,960 bytes; its static metadata is not runtime-execution evidence.",
"ElectronAppWrapper.js static analysis was interrupted (analysis_status: interrupted; observation jag_observation_3204e11b746fc2ce40e663e2a44066ac1d2e79a08e6030b4e55751904936abfd).",
"JavaScript and HTML were handled inertly; no application code or bundle bootstrap executed."
]
},
"failures": [],
"event_types": {
"thread.started": 1,
"item.completed": 16,
"turn.started": 1,
"item.started": 12,
"turn.completed": 1
},
"conditions": "Actual Codex CLI, fresh process/MCP, same current backend and caller question. Normal existing auth; --ignore-user-config, no HOME/CODEX_HOME mutation or credential copy. Export/local-shell baseline and candidate share both existing tools; candidate additionally allows inspect_analysis_view. Client code-mode host remains enabled because this installed Codex requires it for all tool dispatch; the experimental code_mode and code_mode_only features remain disabled. Apps/plugins, skills discovery and other agents disabled in both. Workspace-write sandbox. Requested alias is not proof of underlying model identity. Source hashing/model billing unmeasured here; external observer supplies whole process-family costs. Regenerable exports removed with workspace.",
"actual_operation_count": 12,
"mcp_call_count": 2,
"failed_command_count": 2,
"expected_partial_error_count": 1,
"operations": [
{
"type": "mcp_tool_call",
"tool": "analyze_javascript_application",
"arguments": {
"input_path": "/tmp/rea-native-handoff-20261015/cases/available/app.asar",
"format": "asar",
"source_paths": [
"ElectronAppWrapper.js",
"ElectronAppWrapper.js.map",
"index.html",
"package.json",
"node_modules/keytar/build/Release/keytar.node"
],
"detail": "summary",
"analysis_timeout_ms": 1
},
"status": "failed"
},
{
"type": "mcp_tool_call",
"tool": "export_evidence_bundle",
"arguments": {
"path": "/tmp/rea-facts-agent-9x8HfG/evidence.json"
},
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq 'keys' evidence.json && jq '.records | length' evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '.records[0] | keys' evidence.json && jq '.records[0]' evidence.json | head -c 12000\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '{operation, parameters, normalized_keys:(.normalized_result|keys), raw_keys:(.raw_result|keys), graph_keys:(.normalized_result.graph|keys), semantic_keys:(.normalized_result.semantic_graph|keys)}' evidence.json\"",
"exit_code": 5,
"status": "failed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '.records[0] | {operation, parameters, normalized_keys:(.normalized_result|keys), raw_kind:(.raw_result|type), graph_keys:(.normalized_result.graph|keys), semantic_kind:(.normalized_result.semantic_graph|type)}' evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '.records[0].normalized_result | {input_path, root_artifact_sha256, inventory_manifest_id, inventory_graph_sha256, source_selection, statistics, summary, graph_coverage:.graph.coverage, semantic_graph}' evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '.records[0].normalized_result.graph.nodes | {type:(type), length:length, first:(.[0]|keys)}' evidence.json\njq '.records[0].normalized_result.graph.nodes[] | select((tostring | contains(\\\"ElectronAppWrapper.js\\\")) or (tostring | contains(\\\"node_modules/keytar/build/Release/keytar.node\\\")) or (tostring | contains(\\\"index.html\\\")) or (tostring | contains(\\\"package.json\\\")))' evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq --argjson paths '[\\\"ElectronAppWrapper.js\\\",\\\"ElectronAppWrapper.js.map\\\",\\\"index.html\\\",\\\"package.json\\\",\\\"node_modules/keytar/build/Release/keytar.node\\\"]' '\n .records[0].normalized_result.graph.nodes[]\n | select(any(.observations[]?; (.evidence.location.value.path? // \\\"\\\") as \"'$p | $paths | index($p)))\n | {node_id,kind,identity, observations:[.observations[] | select((.evidence.location.value.path? // \"\") as $p | $paths | index($p)) | {observation_id,label,properties,evidence:{authority:.evidence.authority,confidence:.evidence.confidence,state:.evidence.state,coverage:.evidence.coverage,extractor_operation:.evidence.extractor.operation,limitations:.evidence.limitations,artifact:.evidence.artifact,location:.evidence.location}}]}\n'\"' evidence.json\"",
"exit_code": 3,
"status": "failed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq --argjson paths '[\\\"ElectronAppWrapper.js\\\",\\\"ElectronAppWrapper.js.map\\\",\\\"index.html\\\",\\\"package.json\\\",\\\"node_modules/keytar/build/Release/keytar.node\\\"]' '\n .records[0].normalized_result.graph.nodes[]\n | select(any(.observations[]?; (.evidence.location.value.path? // \\\"\\\") as \"'$p | $paths | index($p)))\n | {node_id:.node_id, kind:.kind, identity:.identity, observations:[.observations[] | select((.evidence.location.value.path? // \"\") as $p | $paths | index($p)) | {observation_id:.observation_id,label:.label,properties:.properties,evidence:{authority:.evidence.authority,confidence:.evidence.confidence,state:.evidence.state,coverage:.evidence.coverage,extractor_operation:.evidence.extractor.operation,limitations:.evidence.limitations,artifact:.evidence.artifact,location:.evidence.location}}]}\n'\"' evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '.records[0].normalized_result.semantic_graph.coverage | {keys:(keys), families:[.families[] | {family,status,retained_relations,omitted_relations,unknown_count:(.unknown_ids|length)}], unknowns_count:(.unknowns|length)}' evidence.json\njq '.records[0].normalized_result.graph | {schema,graph_id,root_node_ids,limitations}' evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq '.records[0].normalized_result.semantic_graph.coverage | {status,truncated,omitted_nodes,omitted_relations,limits}' evidence.json\njq '.records[0] | {evidence_id,authority,confidence,operation,parameters,limitations}' evidence.json\"",
"exit_code": 0,
"status": "completed"
}
],
"observed_parent_evidence_id": "ev_50a8dc024495aa3c318f3baa0c3433c90e0f72827eafccf9704bd5382b4de28f",
"trial_sha256": "1988d55d343e21ab5ed10e627fd80df0668c7b1f3beab9af69a1f403fa15a0a9",
"events_sha256": "099763ff6bc8936bb0beee8accec26c02a6be73c5861e994052404f9e4670ebc",
"grade": "See reproducible field checks and preserved original answer; no aggregate success-rate claim."
},
"resources": {
"resource_scope": "rea-efficiency-9272dc4aaef04621a27186769e2c37e6.scope",
"peak_cgroup_bytes_sampled": 1807224832,
"elapsed_seconds": 170.297,
"abort": null,
"hard_memory_bytes": 8589934592,
"early_stop_bytes": 6442450944,
"cpu_quota_percent": 100,
"cpu_affinity": [15],
"task_ceiling": 192,
"peak_tasks_sampled": 91,
"resource_events_last_observed": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
},
"resource_events_final": null,
"resource_counters_verified": false,
"cpu_stat_last_observed": {
"usage_usec": 67064097,
"user_usec": 56736167,
"system_usec": 10327930,
"nr_periods": 1702,
"nr_throttled": 69,
"throttled_usec": 83318,
"nr_bursts": 0,
"burst_usec": 0
},
"payload_resource_observation": {
"phase": "payload-exited-observer-alive",
"ownership_token": "rea-efficiency-9272dc4aaef04621a27186769e2c37e6.scope",
"payload_exit_code": 0,
"observer_pid": 3100301,
"remaining_processes": [3100301],
"payload_cleanup_verified": true,
"cpu_stat": {
"usage_usec": 67062935,
"user_usec": 56735184,
"system_usec": 10327751,
"nr_periods": 1702,
"nr_throttled": 69,
"throttled_usec": 83318,
"nr_bursts": 0,
"burst_usec": 0
},
"memory_peak_bytes": 1807712256,
"control_group": "user.slice/user-1004.slice/user@1004.service/app.slice/rea-efficiency-9272dc4aaef04621a27186769e2c37e6.scope",
"resource_events": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
}
},
"payload_resource_observation_verified": true,
"payload_observation_scope": "Counters at payload exit while observer remains alive; not final whole-scope counters.",
"payload_observer_sources_sha256": {
"resource-run.py": "7728862171415e7dee2c11af2ead2b9a54265fccaf82a7113956d36b29065e33",
"resource_payload.py": "6f089e645459eba80c5d73e39c21606c78173a44daf49fabc3b88c4631ce51c6"
}
}
},
{
"name": "partial-view",
"version": "v2",
"result": {
"task": "partial",
"arm": "view",
"requested_model": "gpt-5.6-terra",
"reasoning": "high",
"harness_sha256": "43a4d59016c1fec1a9a2957c9b32c32fb8a91e77311c2813f05fdf89ae388fca",
"cli_version": "0.161.0",
"enabled_tools": [
"analyze_javascript_application",
"export_evidence_bundle",
"inspect_analysis_view"
],
"code_mode_host": true,
"prompt": "Investigate the real shipped Joplin v3.7.21 ASAR at /tmp/rea-native-handoff-20261015/cases/available/app.asar using the configured REA MCP server. Preserve this caller-selected source_paths array exactly: [\"ElectronAppWrapper.js\",\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"]. Use detail summary for preparation. Do not execute or modify the application, download anything, inspect the REA repository, read raw ASAR bytes through shell tools, or start other agents. Local shell/programming is allowed only to inspect/project a retained Evidence export in your workspace, not to bypass the analysis backend. Return facts supported by actual tools and cite the actual parent/observation IDs. Runtime execution must not be inferred merely from static metadata. Stop when the question is answered.\nUse analysis_timeout_ms:1 exactly, deliberately producing a partial observation; do not retry with a longer deadline or broader source selection. Assess what remains usable after interruption for [\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"]. Report the exact native byte identity and execution-evidence status, and each unavailable processing operation for the three metadata paths, with its actual phase-entry status, authority/state/confidence and observation ID. Package fields may be null when not analyzed. Keep global application/semantic coverage explicit.",
"prompt_sha256": "74948c6a86a5d8a222e7c68cd1c281e0ae9da159294f74369778ce5d9b838afc",
"elapsed_ms": 192063.102106,
"exit_code": 0,
"usage": [
{
"input_tokens": 256075,
"cached_input_tokens": 214528,
"cache_write_input_tokens": 0,
"output_tokens": 2596,
"reasoning_output_tokens": 911
}
],
"other_completed_items": [
{
"id": "item_0",
"type": "error",
"message": "Under-development features enabled: skip_host_skill_discovery. Under-development features are incomplete and may behave unpredictably. To suppress this warning, set `suppress_unstable_features_warning = true` in /home/yann/.codex/config.toml."
}
],
"answer": {
"parent_evidence_id": "ev_50a8dc024495aa3c318f3baa0c3433c90e0f72827eafccf9704bd5382b4de28f",
"native": {
"path": "node_modules/keytar/build/Release/keytar.node",
"node_id": "jag_node_98ccdef0e85d67cba9cc843193c5ba877f0a73ba3fa7d3581f6db0396a707b2d",
"sha256": "0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a",
"observed_byte_identity": true,
"runtime_execution": "unknown",
"observation_ids": [
"jag_observation_d7fbf97718fa986435ef951cf11b73f63610f59facd1b40c22fc9f06876d54bc"
]
},
"package": {
"name": null,
"version": null
},
"processing_gaps": [
{
"path": "ElectronAppWrapper.js.map",
"operation": "parse-local-source-map",
"analysis_status": "not-started",
"authority": "artifact-bytes",
"state": "unavailable",
"confidence": "unknown",
"observation_id": "jag_observation_4b04b2982325de96322efd493507386b986aca57309e959870831dbd6dffd4fd"
},
{
"path": "index.html",
"operation": "parse-html-script-references",
"analysis_status": "not-started",
"authority": "artifact-bytes",
"state": "unavailable",
"confidence": "unknown",
"observation_id": "jag_observation_f432dffb800852a9d28d2f85c17ae6b5d83b7b2ae5780021169506a8d08f0d35"
},
{
"path": "package.json",
"operation": "parse-package-json",
"analysis_status": "not-started",
"authority": "artifact-bytes",
"state": "unavailable",
"confidence": "unknown",
"observation_id": "jag_observation_5dae4759fcf36b25470467347515c95207d69d7ececfc17a1d90ecfbbea4dc79"
}
],
"source_coverage": {
"application": "partial; interrupted by javascript_analysis_worker_timeout_ms=1; 5,347 application unknowns",
"semantic": "partial and truncated; interrupted by javascript_analysis_worker_timeout_ms=1; 40,164 semantic unknowns"
},
"limitations": [
"The caller-selected source_paths array was preserved exactly.",
"The 1 ms analysis deadline produced provider_timeout partial Evidence; all three metadata operations were not-started, unavailable, and limited by that interruption.",
"The native addon's identity is observed from shipped artifact bytes with exact confidence, but no runtime-execution evidence was retained; static inventory does not establish execution.",
"No package metadata was parsed, so package name and version remain null.",
"Unselected inventory scope remains unknown (5,345 files)."
]
},
"failures": [],
"event_types": {
"thread.started": 1,
"item.completed": 9,
"turn.started": 1,
"item.started": 4,
"turn.completed": 1
},
"conditions": "Actual Codex CLI, fresh process/MCP, same current backend and caller question. Normal existing auth; --ignore-user-config, no HOME/CODEX_HOME mutation or credential copy. Export/local-shell baseline and candidate share both existing tools; candidate additionally allows inspect_analysis_view. Client code-mode host remains enabled because this installed Codex requires it for all tool dispatch; the experimental code_mode and code_mode_only features remain disabled. Apps/plugins, skills discovery and other agents disabled in both. Workspace-write sandbox. Requested alias is not proof of underlying model identity. Source hashing/model billing unmeasured here; external observer supplies whole process-family costs. Regenerable exports removed with workspace.",
"actual_operation_count": 4,
"mcp_call_count": 4,
"failed_command_count": 0,
"expected_partial_error_count": 1,
"operations": [
{
"type": "mcp_tool_call",
"tool": "analyze_javascript_application",
"arguments": {
"input_path": "/tmp/rea-native-handoff-20261015/cases/available/app.asar",
"format": "asar",
"detail": "summary",
"analysis_timeout_ms": 1,
"source_paths": [
"ElectronAppWrapper.js",
"ElectronAppWrapper.js.map",
"index.html",
"package.json",
"node_modules/keytar/build/Release/keytar.node"
]
},
"status": "failed"
},
{
"type": "mcp_tool_call",
"tool": "inspect_analysis_view",
"arguments": {
"source": {
"kind": "retained-evidence",
"evidence_id": "ev_50a8dc024495aa3c318f3baa0c3433c90e0f72827eafccf9704bd5382b4de28f"
},
"view": {
"kind": "summary"
}
},
"status": "completed"
},
{
"type": "mcp_tool_call",
"tool": "inspect_analysis_view",
"arguments": {
"source": {
"kind": "retained-evidence",
"evidence_id": "ev_50a8dc024495aa3c318f3baa0c3433c90e0f72827eafccf9704bd5382b4de28f"
},
"view": {
"kind": "javascript-facts",
"where": {
"paths": [
"ElectronAppWrapper.js.map",
"index.html",
"package.json",
"node_modules/keytar/build/Release/keytar.node"
]
},
"property_keys": [],
"include_available_property_keys": true,
"offset": 0,
"limit": 64
}
},
"status": "completed"
},
{
"type": "mcp_tool_call",
"tool": "inspect_analysis_view",
"arguments": {
"source": {
"kind": "retained-evidence",
"evidence_id": "ev_50a8dc024495aa3c318f3baa0c3433c90e0f72827eafccf9704bd5382b4de28f"
},
"view": {
"kind": "javascript-facts",
"where": {
"paths": [
"ElectronAppWrapper.js.map",
"index.html",
"package.json"
],
"kinds": ["unknown"]
},
"property_keys": [
"path",
"operation",
"analysis_status",
"analysis_failure",
"limitation"
],
"offset": 0,
"limit": 64
}
},
"status": "completed"
}
],
"observed_parent_evidence_id": "ev_50a8dc024495aa3c318f3baa0c3433c90e0f72827eafccf9704bd5382b4de28f",
"trial_sha256": "5ad6fde05e6245b2aeadee7e18bc268d7af7eac842000e46714ebcf4c3a54852",
"events_sha256": "86926f9a1812a207c39f4accf84babfe8169dab4c4fafd01369a821313e1b5ed",
"grade": "See reproducible field checks and preserved original answer; no aggregate success-rate claim."
},
"resources": {
"resource_scope": "rea-efficiency-22f09e5db62a4bbb80340de3e3a5934a.scope",
"peak_cgroup_bytes_sampled": 1175142400,
"elapsed_seconds": 192.489,
"abort": null,
"hard_memory_bytes": 8589934592,
"early_stop_bytes": 6442450944,
"cpu_quota_percent": 100,
"cpu_affinity": [15],
"task_ceiling": 192,
"peak_tasks_sampled": 79,
"resource_events_last_observed": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
},
"resource_events_final": null,
"resource_counters_verified": false,
"cpu_stat_last_observed": {
"usage_usec": 100814227,
"user_usec": 88731402,
"system_usec": 12082825,
"nr_periods": 1924,
"nr_throttled": 3,
"throttled_usec": 2704,
"nr_bursts": 0,
"burst_usec": 0
},
"payload_resource_observation": {
"phase": "payload-exited-observer-alive",
"ownership_token": "rea-efficiency-22f09e5db62a4bbb80340de3e3a5934a.scope",
"payload_exit_code": 0,
"observer_pid": 3101110,
"remaining_processes": [3101110],
"payload_cleanup_verified": true,
"cpu_stat": {
"usage_usec": 100813091,
"user_usec": 88730402,
"system_usec": 12082689,
"nr_periods": 1923,
"nr_throttled": 3,
"throttled_usec": 2704,
"nr_bursts": 0,
"burst_usec": 0
},
"memory_peak_bytes": 1175404544,
"control_group": "user.slice/user-1004.slice/user@1004.service/app.slice/rea-efficiency-22f09e5db62a4bbb80340de3e3a5934a.scope",
"resource_events": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
}
},
"payload_resource_observation_verified": true,
"payload_observation_scope": "Counters at payload exit while observer remains alive; not final whole-scope counters.",
"payload_observer_sources_sha256": {
"resource-run.py": "7728862171415e7dee2c11af2ead2b9a54265fccaf82a7113956d36b29065e33",
"resource_payload.py": "6f089e645459eba80c5d73e39c21606c78173a44daf49fabc3b88c4631ce51c6"
}
}
},
{
"name": "negative-view",
"version": "v2",
"result": {
"task": "negative",
"arm": "view",
"requested_model": "gpt-5.6-terra",
"reasoning": "high",
"harness_sha256": "43a4d59016c1fec1a9a2957c9b32c32fb8a91e77311c2813f05fdf89ae388fca",
"cli_version": "0.161.0",
"enabled_tools": [
"analyze_javascript_application",
"export_evidence_bundle",
"inspect_analysis_view"
],
"code_mode_host": true,
"prompt": "Investigate the real shipped Joplin v3.7.21 ASAR at /tmp/rea-native-handoff-20261015/cases/available/app.asar using the configured REA MCP server. Preserve this caller-selected source_paths array exactly: [\"ElectronAppWrapper.js\",\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"]. Use detail summary for preparation. Do not execute or modify the application, download anything, inspect the REA repository, read raw ASAR bytes through shell tools, or start other agents. Local shell/programming is allowed only to inspect/project a retained Evidence export in your workspace, not to bypass the analysis backend. Return facts supported by actual tools and cite the actual parent/observation IDs. Runtime execution must not be inferred merely from static metadata. Stop when the question is answered.\nUse the normal analysis deadline. Someone claims that the observed native add-on node_modules/keytar/build/Release/keytar.node must have executed because the file has an exact byte digest. Establish the actual file identity from retained evidence and assess that claim. Package data and metadata-phase inventories are not requested: return null package fields and an empty processing_gaps list. Report source coverage and limitations; do not promote byte presence into runtime execution.",
"prompt_sha256": "b0caf037de65ab0dbe356507ac0b76b1cf909b9460c8685708d94abac41a239e",
"elapsed_ms": 93564.128426,
"exit_code": 0,
"usage": [
{
"input_tokens": 188514,
"cached_input_tokens": 148736,
"cache_write_input_tokens": 0,
"output_tokens": 1963,
"reasoning_output_tokens": 573
}
],
"other_completed_items": [
{
"id": "item_0",
"type": "error",
"message": "Under-development features enabled: skip_host_skill_discovery. Under-development features are incomplete and may behave unpredictably. To suppress this warning, set `suppress_unstable_features_warning = true` in /home/yann/.codex/config.toml."
}
],
"answer": {
"parent_evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9",
"native": {
"path": "node_modules/keytar/build/Release/keytar.node",
"node_id": "jag_node_98ccdef0e85d67cba9cc843193c5ba877f0a73ba3fa7d3581f6db0396a707b2d",
"sha256": "0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a",
"observed_byte_identity": true,
"runtime_execution": "unknown",
"observation_ids": [
"jag_observation_d7fbf97718fa986435ef951cf11b73f63610f59facd1b40c22fc9f06876d54bc",
"jag_observation_a115f987aff7345bfcdb4b58b33b30e084e0a91b6adaf0b995f0e03717161be4"
]
},
"package": {
"name": null,
"version": null
},
"processing_gaps": [],
"source_coverage": {
"application": "partial; the exact caller-selected source_paths array was retained, with 5,345 inventoried files unselected and 5,343 application unknowns.",
"semantic": "partial; 41,161 semantic unknowns remain. The selected native add-on has exact, complete artifact-byte inventory observations."
},
"limitations": [
"The byte digest establishes only identity/presence: an unpacked 76,960-byte native add-on at the stated path. It does not establish loading or execution.",
"The execution claim is unsupported and runtime execution remains unknown. REA analyzed JavaScript/HTML inertly and did not execute bundle bootstrap code; static imports, entrypoints, and relationships do not prove runtime execution.",
"Native identity evidence is artifact-bytes, observed, exact, and complete: native-addon observation jag_observation_d7fbf97718fa986435ef951cf11b73f63610f59facd1b40c22fc9f06876d54bc; matching ASAR-entry observation jag_observation_a115f987aff7345bfcdb4b58b33b30e084e0a91b6adaf0b995f0e03717161be4.",
"Evidence export was retained locally at /tmp/rea-facts-agent-6fKngf/rea-evidence-bundle.json."
]
},
"failures": [],
"event_types": {
"thread.started": 1,
"item.completed": 10,
"turn.started": 1,
"item.started": 5,
"turn.completed": 1
},
"conditions": "Actual Codex CLI, fresh process/MCP, same current backend and caller question. Normal existing auth; --ignore-user-config, no HOME/CODEX_HOME mutation or credential copy. Export/local-shell baseline and candidate share both existing tools; candidate additionally allows inspect_analysis_view. Client code-mode host remains enabled because this installed Codex requires it for all tool dispatch; the experimental code_mode and code_mode_only features remain disabled. Apps/plugins, skills discovery and other agents disabled in both. Workspace-write sandbox. Requested alias is not proof of underlying model identity. Source hashing/model billing unmeasured here; external observer supplies whole process-family costs. Regenerable exports removed with workspace.",
"actual_operation_count": 5,
"mcp_call_count": 4,
"failed_command_count": 0,
"expected_partial_error_count": 0,
"operations": [
{
"type": "mcp_tool_call",
"tool": "analyze_javascript_application",
"arguments": {
"input_path": "/tmp/rea-native-handoff-20261015/cases/available/app.asar",
"format": "asar",
"detail": "summary",
"source_paths": [
"ElectronAppWrapper.js",
"ElectronAppWrapper.js.map",
"index.html",
"package.json",
"node_modules/keytar/build/Release/keytar.node"
]
},
"status": "completed"
},
{
"type": "mcp_tool_call",
"tool": "inspect_analysis_view",
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"evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9"
},
"view": {
"kind": "javascript-facts",
"where": {
"paths": ["node_modules/keytar/build/Release/keytar.node"]
},
"property_keys": [],
"include_available_property_keys": true,
"offset": 0,
"limit": 64
}
},
"status": "completed"
},
{
"type": "mcp_tool_call",
"tool": "inspect_analysis_view",
"arguments": {
"source": {
"kind": "retained-evidence",
"evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9"
},
"view": {
"kind": "javascript-facts",
"where": {
"paths": ["node_modules/keytar/build/Release/keytar.node"]
},
"property_keys": [
"bytes",
"file_kind",
"path",
"unpacked",
"entry_sha256",
"inventory_artifact_id",
"text_status",
"parse_status"
],
"offset": 0,
"limit": 64
}
},
"status": "completed"
},
{
"type": "mcp_tool_call",
"tool": "export_evidence_bundle",
"arguments": {
"path": "/tmp/rea-facts-agent-6fKngf/rea-evidence-bundle.json",
"overwrite": false
},
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -r 'keys, (.records | length), (.records[] | {evidence_id, operation, parent: .normalized_result.parent_evidence_id?, rows: [.normalized_result.rows[]? | {node_id, kind, observation_id, identity, properties, evidence}]})' rea-evidence-bundle.json\"",
"exit_code": 0,
"status": "completed"
}
],
"observed_parent_evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9",
"trial_sha256": "65b87a84887a2976f83a875dbfe87b0cfedb0776919fd29118cb52647937268f",
"events_sha256": "4ea807ce618ef2f308eb2df273fe049d3116fe935e0f5aeb51647f9d648fd431",
"grade": "See reproducible field checks and preserved original answer; no aggregate success-rate claim."
},
"resources": {
"resource_scope": "rea-efficiency-190088f60a9a4aecb5022440a91c70c1.scope",
"peak_cgroup_bytes_sampled": 1869217792,
"elapsed_seconds": 93.97,
"abort": null,
"hard_memory_bytes": 8589934592,
"early_stop_bytes": 6442450944,
"cpu_quota_percent": 100,
"cpu_affinity": [15],
"task_ceiling": 192,
"peak_tasks_sampled": 86,
"resource_events_last_observed": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
},
"resource_events_final": null,
"resource_counters_verified": false,
"cpu_stat_last_observed": {
"usage_usec": 42554857,
"user_usec": 36399471,
"system_usec": 6155385,
"nr_periods": 939,
"nr_throttled": 24,
"throttled_usec": 25164,
"nr_bursts": 0,
"burst_usec": 0
},
"payload_resource_observation": {
"phase": "payload-exited-observer-alive",
"ownership_token": "rea-efficiency-190088f60a9a4aecb5022440a91c70c1.scope",
"payload_exit_code": 0,
"observer_pid": 3101766,
"remaining_processes": [3101766],
"payload_cleanup_verified": true,
"cpu_stat": {
"usage_usec": 42553715,
"user_usec": 36398495,
"system_usec": 6155220,
"nr_periods": 939,
"nr_throttled": 24,
"throttled_usec": 25164,
"nr_bursts": 0,
"burst_usec": 0
},
"memory_peak_bytes": 1869479936,
"control_group": "user.slice/user-1004.slice/user@1004.service/app.slice/rea-efficiency-190088f60a9a4aecb5022440a91c70c1.scope",
"resource_events": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
}
},
"payload_resource_observation_verified": true,
"payload_observation_scope": "Counters at payload exit while observer remains alive; not final whole-scope counters.",
"payload_observer_sources_sha256": {
"resource-run.py": "7728862171415e7dee2c11af2ead2b9a54265fccaf82a7113956d36b29065e33",
"resource_payload.py": "6f089e645459eba80c5d73e39c21606c78173a44daf49fabc3b88c4631ce51c6"
}
}
},
{
"name": "negative-export",
"version": "v2",
"result": {
"task": "negative",
"arm": "export",
"requested_model": "gpt-5.6-terra",
"reasoning": "high",
"harness_sha256": "43a4d59016c1fec1a9a2957c9b32c32fb8a91e77311c2813f05fdf89ae388fca",
"cli_version": "0.161.0",
"enabled_tools": [
"analyze_javascript_application",
"export_evidence_bundle"
],
"code_mode_host": true,
"prompt": "Investigate the real shipped Joplin v3.7.21 ASAR at /tmp/rea-native-handoff-20261015/cases/available/app.asar using the configured REA MCP server. Preserve this caller-selected source_paths array exactly: [\"ElectronAppWrapper.js\",\"ElectronAppWrapper.js.map\",\"index.html\",\"package.json\",\"node_modules/keytar/build/Release/keytar.node\"]. Use detail summary for preparation. Do not execute or modify the application, download anything, inspect the REA repository, read raw ASAR bytes through shell tools, or start other agents. Local shell/programming is allowed only to inspect/project a retained Evidence export in your workspace, not to bypass the analysis backend. Return facts supported by actual tools and cite the actual parent/observation IDs. Runtime execution must not be inferred merely from static metadata. Stop when the question is answered.\nUse the normal analysis deadline. Someone claims that the observed native add-on node_modules/keytar/build/Release/keytar.node must have executed because the file has an exact byte digest. Establish the actual file identity from retained evidence and assess that claim. Package data and metadata-phase inventories are not requested: return null package fields and an empty processing_gaps list. Report source coverage and limitations; do not promote byte presence into runtime execution.",
"prompt_sha256": "b0caf037de65ab0dbe356507ac0b76b1cf909b9460c8685708d94abac41a239e",
"elapsed_ms": 132315.25256300002,
"exit_code": 0,
"usage": [
{
"input_tokens": 269529,
"cached_input_tokens": 229632,
"cache_write_input_tokens": 0,
"output_tokens": 2920,
"reasoning_output_tokens": 1013
}
],
"other_completed_items": [
{
"id": "item_0",
"type": "error",
"message": "Under-development features enabled: skip_host_skill_discovery. Under-development features are incomplete and may behave unpredictably. To suppress this warning, set `suppress_unstable_features_warning = true` in /home/yann/.codex/config.toml."
}
],
"answer": {
"parent_evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9",
"native": {
"path": "node_modules/keytar/build/Release/keytar.node",
"node_id": "jag_node_98ccdef0e85d67cba9cc843193c5ba877f0a73ba3fa7d3581f6db0396a707b2d",
"sha256": "0700016bcd761cbe02d275f2046c7cc42f39f730a50d66e3d3307aa9d413373a",
"observed_byte_identity": true,
"runtime_execution": "unknown",
"observation_ids": [
"jag_observation_d7fbf97718fa986435ef951cf11b73f63610f59facd1b40c22fc9f06876d54bc",
"jag_observation_a115f987aff7345bfcdb4b58b33b30e084e0a91b6adaf0b995f0e03717161be4"
]
},
"package": {
"name": null,
"version": null
},
"processing_gaps": [],
"source_coverage": {
"application": "partial: the caller-selected five paths were retained; 5,345 inventoried files were outside source analysis",
"semantic": "partial: static semantic graph; 41,161 semantic unknowns remain"
},
"limitations": [
"The exact SHA-256 and 76,960-byte native-addon observation establish that this unpacked ASAR entry maps to those observed bytes, not that it was loaded or executed.",
"REA analyzed JavaScript/HTML inertly and did not execute bootstrap code. Static imports, entrypoints, and relationships do not prove runtime execution; no runtime-execution evidence was observed.",
"The summary reports zero native-addon bindings and zero resolved native-addon bindings within the selected static scope. This is not proof of non-execution, especially with incomplete source coverage.",
"Therefore the claim that an exact byte digest must mean keytar.node executed is unsupported; runtime execution remains unknown."
]
},
"failures": [],
"event_types": {
"thread.started": 1,
"item.completed": 13,
"turn.started": 1,
"item.started": 8,
"turn.completed": 1
},
"conditions": "Actual Codex CLI, fresh process/MCP, same current backend and caller question. Normal existing auth; --ignore-user-config, no HOME/CODEX_HOME mutation or credential copy. Export/local-shell baseline and candidate share both existing tools; candidate additionally allows inspect_analysis_view. Client code-mode host remains enabled because this installed Codex requires it for all tool dispatch; the experimental code_mode and code_mode_only features remain disabled. Apps/plugins, skills discovery and other agents disabled in both. Workspace-write sandbox. Requested alias is not proof of underlying model identity. Source hashing/model billing unmeasured here; external observer supplies whole process-family costs. Regenerable exports removed with workspace.",
"actual_operation_count": 8,
"mcp_call_count": 2,
"failed_command_count": 0,
"expected_partial_error_count": 0,
"operations": [
{
"type": "mcp_tool_call",
"tool": "analyze_javascript_application",
"arguments": {
"input_path": "/tmp/rea-native-handoff-20261015/cases/available/app.asar",
"format": "asar",
"detail": "summary",
"source_paths": [
"ElectronAppWrapper.js",
"ElectronAppWrapper.js.map",
"index.html",
"package.json",
"node_modules/keytar/build/Release/keytar.node"
]
},
"status": "completed"
},
{
"type": "mcp_tool_call",
"tool": "export_evidence_bundle",
"arguments": {
"path": "/tmp/rea-facts-agent-VVx5vE/joplin-v3.7.21-evidence.json"
},
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"rg -n -m 20 -F 'node_modules/keytar/build/Release/keytar.node' /tmp/rea-facts-agent-VVx5vE/joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c --arg p 'node_modules/keytar/build/Release/keytar.node' '.. | objects | select(.path? == \"'$p)'\"' /tmp/rea-facts-agent-VVx5vE/joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c --arg p 'node_modules/keytar/build/Release/keytar.node' '.records[0].normalized_result.graph.nodes[] | select((.properties.path? == \"'$p) or (.evidence.location.value.path? == $p))'\"' /tmp/rea-facts-agent-VVx5vE/joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c '.records[0].normalized_result.graph | {node_type:(.nodes|type), edge_type:(.edges|type), node_count:(.nodes|length), edge_count:(.edges|length), root_node_ids}' /tmp/rea-facts-agent-VVx5vE/joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c --arg p 'node_modules/keytar/build/Release/keytar.node' '.records[0].normalized_result.graph.nodes[] | select(tostring | contains(\"'$p))'\"' /tmp/rea-facts-agent-VVx5vE/joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
},
{
"type": "command_execution",
"command": "/bin/bash -lc \"jq -c --arg n1 'jag_node_98ccdef0e85d67cba9cc843193c5ba877f0a73ba3fa7d3581f6db0396a707b2d' --arg n2 'jag_node_f4dd1b7be33a5a9dcbdb40f3007321f6ae6c9918717965bd4ff2bf767e3cfad4' '.records[0].normalized_result.graph.edges[] | select(.source_node_id == \"'$n1 or .target_node_id == $n1 or .source_node_id == $n2 or .target_node_id == $n2)'\"' /tmp/rea-facts-agent-VVx5vE/joplin-v3.7.21-evidence.json\"",
"exit_code": 0,
"status": "completed"
}
],
"observed_parent_evidence_id": "ev_999601c67171097cc9e737e2552d40ca3cf41f60739712790b44a4431709d9e9",
"trial_sha256": "3f0cee452eb9f569c91c6542607e119323a36c811977835d008ca24567e46377",
"events_sha256": "07a23ad1dcf42c6bb066bf3e8e3d7765fa270a932e185a5d127c1726fa3f087a",
"grade": "See reproducible field checks and preserved original answer; no aggregate success-rate claim."
},
"resources": {
"resource_scope": "rea-efficiency-49baaf1713d8414980a686a4f2d0d1c4.scope",
"peak_cgroup_bytes_sampled": 1800904704,
"elapsed_seconds": 132.727,
"abort": null,
"hard_memory_bytes": 8589934592,
"early_stop_bytes": 6442450944,
"cpu_quota_percent": 100,
"cpu_affinity": [15],
"task_ceiling": 192,
"peak_tasks_sampled": 81,
"resource_events_last_observed": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
},
"resource_events_final": null,
"resource_counters_verified": false,
"cpu_stat_last_observed": {
"usage_usec": 53361082,
"user_usec": 45194642,
"system_usec": 8166439,
"nr_periods": 1326,
"nr_throttled": 38,
"throttled_usec": 53973,
"nr_bursts": 0,
"burst_usec": 0
},
"payload_resource_observation": {
"phase": "payload-exited-observer-alive",
"ownership_token": "rea-efficiency-49baaf1713d8414980a686a4f2d0d1c4.scope",
"payload_exit_code": 0,
"observer_pid": 3102806,
"remaining_processes": [3102806],
"payload_cleanup_verified": true,
"cpu_stat": {
"usage_usec": 53359974,
"user_usec": 45193704,
"system_usec": 8166270,
"nr_periods": 1326,
"nr_throttled": 38,
"throttled_usec": 53973,
"nr_bursts": 0,
"burst_usec": 0
},
"memory_peak_bytes": 1801166848,
"control_group": "user.slice/user-1004.slice/user@1004.service/app.slice/rea-efficiency-49baaf1713d8414980a686a4f2d0d1c4.scope",
"resource_events": {
"memory.events": {
"low": 0,
"high": 0,
"max": 0,
"oom": 0,
"oom_kill": 0,
"oom_group_kill": 0
},
"pids.events": {
"max": 0
}
}
},
"payload_resource_observation_verified": true,
"payload_observation_scope": "Counters at payload exit while observer remains alive; not final whole-scope counters.",
"payload_observer_sources_sha256": {
"resource-run.py": "7728862171415e7dee2c11af2ead2b9a54265fccaf82a7113956d36b29065e33",
"resource_payload.py": "6f089e645459eba80c5d73e39c21606c78173a44daf49fabc3b88c4631ce51c6"
}
}
}
],
"limitations": [
"Fresh process/MCP, warm/uncontrolled file/build/model caches and shared-host scheduling; serial one CPU/8GiB. No statistical performance or all-application claim.",
"Static cl100k_base/tiktoken0.12.0 costs are explicit selected/full input-contract projections; exclude output schemas, exec schema, host rendering, model reasoning and billing.",
"Actual Codex CLI0.161.0 requested gpt-5.6-terra/high; alias does not prove underlying model identity. Usage includes cumulative cached/uncached input/output/reasoning, not peak context or USD.",
"Agent tools are deliberately restricted: analysis+export on baseline, same plus existing inspect_analysis_view on candidate; not a full207-tool host benchmark. Both retain identical available backend information through export.",
"No target/native-provider execution, live browser/Electron session or macOS/Windows provider verification. Native bytes are static observations.",
"At-answer counters include observer/startup and end before repeat/parity/tokenization. External counters are payload-exit-observer-alive, not final whole-scope. Memory includes file cache.",
"Downloadable apps, large retained Evidence and raw agent transcripts are not archived. Compact facts/requests/answers/usage, source and transcript hashes are retained.",
"Raw answer_sha256 is JSON-key-order sensitive; canonical_answer_sha256 and deep equality establish identical selected facts/provenance."
],
"review_fixes": {
"original_head": "7238fd0802c399d9349d8f235b2526c57e5682a5",
"findings": [
"Probe actual CLI version before starting the trial; version failures do not start an agent.",
"Retain the original command/recording/cleanup errors, cleanupResult, resources and owned workspace; use actual snapshot byte counters.",
"Preserve cleanup-time cancellation and completed trial data, reporting success only after finalization."
],
"boundary_cases": 8,
"actual_model_retrials": 0,
"scope": "Actual experiment entrypoint, production private roots/OwnedCommandFailure; controlled command outcomes, no model/app/orphan-process launch. Product backend and fourteen real-app task answers are unchanged."
},
"agent_field_checks": [
{
"name": "direct-export",
"excluded": "CLI tool-dispatch harness failure"
},
{
"name": "direct-export-host",
"checks": {
"parent_matches_actual_tool_receipt": true,
"one_preparation_without_retry": true,
"caller_source_paths_preserved": true,
"summary_preparation": true,
"requested_timeout_preserved": true,
"native_path_node_and_digest": true,
"byte_observation_cited": true,
"static_bytes_not_promoted_to_execution": true,
"package_fields": true,
"exact_requested_processing_phase_facts": true,
"declares_partial_application_and_semantic_coverage": true
},
"qualifications": []
},
{
"name": "direct-view-host",
"checks": {
"parent_matches_actual_tool_receipt": true,
"one_preparation_without_retry": true,
"caller_source_paths_preserved": true,
"summary_preparation": true,
"requested_timeout_preserved": true,
"native_path_node_and_digest": true,
"byte_observation_cited": true,
"static_bytes_not_promoted_to_execution": true,
"package_fields": true,
"exact_requested_processing_phase_facts": false,
"declares_partial_application_and_semantic_coverage": true
},
"qualifications": [
"Additional native citations need node-ownership review; the observed ASAR-entry citation belongs to a different node, although traceable to the same parent.",
"Review original answer: missing original-source content differs from an unavailable processing phase; no unqualified phase-answer success."
]
},
{
"name": "direct-view-discovery",
"checks": {
"parent_matches_actual_tool_receipt": true,
"one_preparation_without_retry": true,
"caller_source_paths_preserved": true,
"summary_preparation": true,
"requested_timeout_preserved": true,
"native_path_node_and_digest": true,
"byte_observation_cited": true,
"static_bytes_not_promoted_to_execution": true,
"package_fields": true,
"exact_requested_processing_phase_facts": true,
"declares_partial_application_and_semantic_coverage": true
},
"qualifications": [
"Additional native citations need node-ownership review; the observed ASAR-entry citation belongs to a different node, although traceable to the same parent."
]
},
{
"name": "partial-export",
"checks": {
"parent_matches_actual_tool_receipt": true,
"one_preparation_without_retry": true,
"caller_source_paths_preserved": true,
"summary_preparation": true,
"requested_timeout_preserved": true,
"native_path_node_and_digest": true,
"byte_observation_cited": true,
"static_bytes_not_promoted_to_execution": true,
"package_fields": true,
"exact_requested_processing_phase_facts": true,
"declares_partial_application_and_semantic_coverage": true
},
"qualifications": [
"Additional native citations need node-ownership review; the observed ASAR-entry citation belongs to a different node, although traceable to the same parent."
]
},
{
"name": "partial-view",
"checks": {
"parent_matches_actual_tool_receipt": true,
"one_preparation_without_retry": true,
"caller_source_paths_preserved": true,
"summary_preparation": true,
"requested_timeout_preserved": true,
"native_path_node_and_digest": true,
"byte_observation_cited": true,
"static_bytes_not_promoted_to_execution": true,
"package_fields": true,
"exact_requested_processing_phase_facts": true,
"declares_partial_application_and_semantic_coverage": true
},
"qualifications": []
},
{
"name": "negative-view",
"checks": {
"parent_matches_actual_tool_receipt": true,
"one_preparation_without_retry": true,
"caller_source_paths_preserved": true,
"summary_preparation": true,
"requested_timeout_preserved": true,
"native_path_node_and_digest": true,
"byte_observation_cited": true,
"static_bytes_not_promoted_to_execution": true,
"package_fields": true,
"exact_requested_processing_phase_facts": true,
"declares_partial_application_and_semantic_coverage": true
},
"qualifications": [
"Additional native citations need node-ownership review; the observed ASAR-entry citation belongs to a different node, although traceable to the same parent."
]
},
{
"name": "negative-export",
"checks": {
"parent_matches_actual_tool_receipt": true,
"one_preparation_without_retry": true,
"caller_source_paths_preserved": true,
"summary_preparation": true,
"requested_timeout_preserved": true,
"native_path_node_and_digest": true,
"byte_observation_cited": true,
"static_bytes_not_promoted_to_execution": true,
"package_fields": true,
"exact_requested_processing_phase_facts": true,
"declares_partial_application_and_semantic_coverage": true
},
"qualifications": [
"Additional native citations need node-ownership review; the observed ASAR-entry citation belongs to a different node, although traceable to the same parent."
]
}
],
"validation_commands": {
"integrated-gates": "npm run docs:generate && npm run check && npm run docs:check && npm run verify:test-discovery && npm run test:focused -- tests/boundary/mcp/javascriptFactsViewMcp.test.ts tests/boundary/mcp/analysisViewMcp.test.ts src/domain/analysisView/analysisView.test.ts src/application/analysisView/AnalysisViewService.test.ts tests/boundary/mcp/toolSchemaValidity.test.ts tests/boundary/mcp/contractPresentation.test.ts",
"final-gates": "npm run docs:generate && npm run check && npm run docs:check && npm run verify:test-discovery && npm run test:focused -- tests/boundary/mcp/javascriptFactsViewMcp.test.ts tests/boundary/mcp/toolSchemaValidity.test.ts tests/boundary/mcp/contractPresentation.test.ts",
"focused-v2": "npm run test:focused -- tests/boundary/mcp/javascriptFactsViewMcp.test.ts tests/boundary/mcp/analysisViewMcp.test.ts src/domain/analysisView/analysisView.test.ts src/application/analysisView/AnalysisViewService.test.ts",
"distinct_focused_cases": 101,
"focused_files": 6,
"documentation_consistency_cases": 5
},
"pre_lifecycle_integration_runtime": {
"runtime_files": 1633,
"algorithm": "sha256 of compact JSON sorted [dist-relative JS path, sha256] pairs, UTF-8",
"runtime_tree_sha256": "6a5763452c1522a782e531e6dda227ea10140f9f9d52148fc1602a6ecf3cea5a"
},
"pre_lifecycle_integration_source_sha256": {
".agents/skills/reverse-engineer-anything/references/javascript-applications.md": "aaa78502a3e95268f6269e75f373908045291fedf6ddd106001555ed06bb2bf6",
"docs/javascript-application-workflows.md": "dfc09de543015c0b24288d5b78dee5057122ae5e476a9512cb2c5f28006eb1a9",
"experiments/analysis-efficiency/javascript-facts-agent-history.json": "ac4d03088d17788b96eb0855850083bd0c22a54684d634f94f020a0491583b45",
"experiments/analysis-efficiency/javascript-facts-agent.mjs": "9a6b4fc87fed586a2c64cdf6f483332872b1445911d644528bb2fc81b600c9e7",
"experiments/analysis-efficiency/javascript-facts-grade.py": "0e47b7f909419187a254899e2d1e96c16ccba8d61ab7ec9f141f9df85a93ab66",
"experiments/analysis-efficiency/test_javascript_facts_agent.py": "c84c524e34032c94f9b9a6f4ca7394fd4f08ea4b76293260673faa3681d20508",
"package.json": "32bed7e549e010ba128b9a20531c5c9e8b9d9428d6c49ece5ea55334e7b1c549",
"scripts/lib/javascript-facts-reference.mjs": "6d0c7885f7819bc0778861d17f8c39775e48d6428150d291a48ae17bdfd2d7c8",
"scripts/verify/javascript/retained-facts.mjs": "3731af8bf557a03ac50da98d1c97a5dd65d4c0b1e6f942304033f728ca3397b3",
"src/contracts/analysisViewToolContracts.ts": "d7facdc03e3945f57cfba8c42c8c505c944cb77e78505cb63d1d5c9bf86c8fec",
"src/domain/analysisView/analysisView.ts": "983219c143347d3ecfe0536e9ca3c97ad9a678de29aba1316bf81b31d4fc92e3",
"src/domain/analysisView/javascriptApplicationCoverage.ts": "1601b4f04062eb49e16fd8de817a45fd3962dae56bc619f0516a887a3b8f4089",
"src/domain/analysisView/javascriptApplicationView.ts": "2f248e5e02522d83457b16188bb57936655650f1226ce2897615f1ba3a7ed8d2",
"src/domain/analysisView/javascriptFactsView.ts": "8d793aa63b4462de5f933dffad0c24ad53700af0acd87c0e5f8d4ee181585a5d",
"src/domain/analysisView/javascriptModuleReferences.ts": "934f502d14e68676f2c8189452ba8be801f4c5312138ddd5d75a03047d930cf4",
"tests/boundary/mcp/javascriptFactsViewMcp.test.ts": "46826fb64779f135ae5b22b7e85417a1f68a3631555d9f2c0e5a6781d5a4fba9"
},
"lifecycle_integration": {
"main_revision": "1b97b0f3707b1cf78ac98bd4ae81638b33cc286f",
"merge_revision": "2ca63f4d9f2e489ce3b5cbccdc204ad0be39551c",
"prior_feature_head": "7ae159bfce56bf82e49e47bc7c8e867b2389d78e",
"upstream_pr": 4274,
"focused_cases": 114,
"focused_files": 7,
"combined_gate_exit_code": 1,
"focused_initial_passed": 113,
"focused_initial_failed": 1,
"isolated_retry_passed": 1,
"retry_scope": "Original test and20-second deadline unchanged. Both CPU15 attempts failed. Completed default-SDK fixture and original assertions passed outside that deadline; client eagerly compiles all207 output schemas. CPU15 measured100percent busy while this task idle. Final unchanged test executed on one CPU10 with same8GiB cap; prior failures retained. Runs across cores/host scheduling do not establish causal performance equivalence.",
"python_suite_counts": [35, 71],
"python_total": 106,
"command": "set -euo pipefail\nnpm ci\nnpm run docs:generate\nnpm run check\nnpm run docs:check\nnpm run verify:test-discovery\nnpm run test:python\nnpm run test:focused -- tests/boundary/mcp/javascriptFactsViewMcp.test.ts tests/boundary/mcp/analysisViewMcp.test.ts src/domain/analysisView/analysisView.test.ts src/application/analysisView/AnalysisViewService.test.ts tests/boundary/mcp/toolSchemaValidity.test.ts tests/boundary/mcp/contractPresentation.test.ts tests/boundary/cli/adbCli.test.ts",
"actual_model_retrials": 0,
"scope": "Latest shared lifecycle/static backend; four fresh real Joplin export/view normal/interrupted controls. Historical model trials and fourteen earlier manual workflows retain their original versions.",
"retry_command": "taskset -c 10 <same 8GiB resource wrapper> npm run test:focused -- tests/boundary/mcp/contractPresentation.test.ts",
"manual_cpu_affinity": [10],
"semantic_coverage_note": "Normal selected rows and their complete Evidence match the previous integration. Parent Evidence changes with semantic_unknown_count41161→41162. The specific extra unknown was not individually isolated; both current export/view workflows must agree with current complete Evidence. Do not claim equality of full normal parent or source coverage."
},
"client_compilation_diagnostic": {
"sdk_client_version": "2.3.1",
"current_revision": "2ca63f4d9f2e489ce3b5cbccdc204ad0be39551c",
"main_control_revision": "1b97b0f3707b1cf78ac98bd4ae81638b33cc286f",
"catalog_tools": 207,
"fixture_named_responses": 16,
"baseline_named_responses": 16,
"output_schema_bytes": {
"main": 128229,
"candidate": 137174,
"encoding": "compact JSON UTF-8"
},
"changed_output_schema_names": ["inspect_analysis_view"],
"largest_observed_compilations": [
{
"stage": "compile",
"ms": 15799.467217,
"name": "inspect_analysis_view",
"compile_ms": 1533.2879049999992,
"output_bytes": 137174
},
{
"stage": "compile",
"ms": 7504.2275309999995,
"name": "annotate_native_function",
"compile_ms": 431.31602099999964,
"output_bytes": 28495
},
{
"stage": "compile",
"ms": 19872.406321,
"name": "capture_browser_scenario",
"compile_ms": 239.93621300000086,
"output_bytes": 36125
},
{
"stage": "compile",
"ms": 7728.668936,
"name": "inspect_native_load_image",
"compile_ms": 224.1101549999994,
"output_bytes": 18141
},
{
"stage": "compile",
"ms": 11532.473517,
"name": "inspect_artifact",
"compile_ms": 221.63715500000035,
"output_bytes": 22688
},
{
"stage": "compile",
"ms": 20310.856451,
"name": "analyze_javascript_application",
"compile_ms": 218.23588500000187,
"output_bytes": 38149
}
],
"original_assertion_replay": {
"verified_catalog_tools": 207,
"verified_named_responses": 16,
"scope": "Original contractPresentation assertions replayed over completed unmodified fixture output; does not turn the timed-out Vitest run into a pass."
},
"actual_fixture_stdout_sha256": "863a8285c95bb0017bf376d991d8cc21d88592a9c7f478d1b0e57ae3d7edbc9c",
"main_fixture_stdout_sha256": "7a58af0e5399c1e59f11c3e4656802d7f13bccbc806595ac7d928aa1a7486586",
"profile_sha256": "27a2a45858610afb9a6e7b0a098e619595ef46b0fc52479229e400080e66ed98",
"scope": "Read-only diagnostic instrumentation; default SDK eagerly compiles every cached output schema on first call. CPU15 was externally saturated; original two20-second fixture failures retained. Unchanged original test passed11.446s on one CPU10, with20-second deadline retained. Main/candidate runs on different transient host scheduling are not a causal latency comparison. No SDK or production source changed.",
"main_control_runtime": {
"runtime_files": 1643,
"algorithm": "sha256 of compact JSON sorted [dist-relative JS path, sha256] pairs, UTF-8",
"runtime_tree_sha256": "8d0c5ed17623ee6ef600dc5218c02dc4c05e3adcf1d9491f4344112e3ed6a100"
}
}
}
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