fix(wiki): link index rows to their own article when labels collide (#3032, #3033)

(cherry picked from commit 2816f9365b)

graphify/wiki.py

@@ -89,8 +89,19 @@ def _md_link(label: str, resolver: dict[str, str]) -> str:
     god nodes get article files — render as plain text instead of a dead link
     that points nowhere even inside Obsidian.
     """
+    return _md_link_to(label, resolver.get(label))
+
+
+def _md_link_to(label: str, slug: str | None) -> str:
+    """Render ``[label](slug.md)`` for a slug that is already known.
+
+    Same output as :func:`_md_link`, minus the label lookup. The index knows the
+    exact slug of every article it lists — two same-labelled articles have
+    distinct slugs — so it links by that slug instead of re-deriving one from the
+    label, which collapses duplicates onto whichever was registered first
+    (#3032/#3033). ``None`` means no article exists, rendered as plain text.
+    """
     text = label.replace("[", r"\[").replace("]", r"\]")
-    slug = resolver.get(label)
     if slug is None:
         return text
     return f"[{text}]({slug}.md)"
@@ -240,9 +251,21 @@ def _index_md(
     god_nodes_data: list[dict],
     total_nodes: int,
     total_edges: int,
-    resolver: dict[str, str] | None = None,
+    community_slugs: dict[int, str],
+    god_articles: list[tuple[str, str]],
 ) -> str:
-    resolver = resolver or {}
+    """Render index.md.
+
+    Takes the slugs the articles were actually written under —
+    ``community_slugs`` (cid -> slug) and ``god_articles`` ((node_id, slug)) —
+    rather than the label -> slug resolver the articles use for prose links.
+    Two communities, or two god nodes, can share a label while owning separate
+    files, and a label lookup cannot tell them apart: it points every row at
+    whichever was registered first and orphans the rest (#3032/#3033).
+    """
+    # A node with no article of its own is absent here, so it renders as plain
+    # text rather than linking to a same-labelled article that isn't it.
+    god_slugs = dict(god_articles)
     lines: list[str] = [
         "# Knowledge Graph Index",
         "",
@@ -259,13 +282,15 @@ def _index_md(
 
     for cid, nodes in sorted(communities.items(), key=lambda x: -len(x[1])):
         label = labels.get(cid, f"Community {cid}")
-        lines.append(f"- {_md_link(label, resolver)} — {len(nodes)} nodes")
+        slug = community_slugs.get(cid)
+        lines.append(f"- {_md_link_to(label, slug)} — {len(nodes)} nodes")
     lines.append("")
 
     if god_nodes_data:
         lines += ["## God Nodes", "(most connected concepts — the load-bearing abstractions)", ""]
         for node in god_nodes_data:
-            lines.append(f"- {_md_link(node['label'], resolver)} — {node['degree']} connections")
+            slug = god_slugs.get(node.get("id"))
+            lines.append(f"- {_md_link_to(node['label'], slug)} — {node['degree']} connections")
         lines.append("")
 
     lines += [
@@ -413,7 +438,11 @@ def to_wiki(
     # Index
     write_text_atomic_if_changed(
         out / "index.md",
-        _index_md(communities, labels, god_nodes_data, G.number_of_nodes(), G.number_of_edges(), resolver),
+        _index_md(
+            communities, labels, god_nodes_data,
+            G.number_of_nodes(), G.number_of_edges(),
+            community_slugs, god_articles,
+        ),
     )
     produced.add("index.md")
 

tests/test_wiki.py

@@ -455,3 +455,76 @@ def test_wiki_links_use_collision_suffixed_slug(tmp_path):
     assert "parser_2.md" in index_targets  # link points at the suffixed file...
     for t in index_targets:
         assert (tmp_path / t).exists(), t  # ...and every target is a real file
+
+
+# Regression tests for #3032 / #3033 - two articles whose labels are *identical*
+# (not merely case-variant, as above) each get their own file, so the index has
+# to link each row to the file that row's article was actually written to.
+
+
+def test_index_links_same_labelled_communities_to_own_articles(tmp_path):
+    """Two communities may carry the same label. Each is written to its own file
+    (`Core.md`, `Core_2.md`), so the index rows must target one each. Resolving
+    the target from the label instead points both rows at whichever community
+    was slugged first, orphaning the second article (#3032)."""
+    G = nx.Graph()
+    G.add_node("n1", label="a", file_type="code", source_file="a.py", community=0)
+    G.add_node("n2", label="b", file_type="code", source_file="b.py", community=0)
+    G.add_node("n3", label="c", file_type="code", source_file="c.py", community=1)
+    G.add_node("n4", label="d", file_type="code", source_file="d.py", community=1)
+    G.add_edge("n1", "n2", relation="calls", confidence="EXTRACTED", weight=1.0)
+    G.add_edge("n3", "n4", relation="calls", confidence="EXTRACTED", weight=1.0)
+    G.add_edge("n1", "n3", relation="references", confidence="INFERRED", weight=1.0)
+    communities = {0: ["n1", "n2"], 1: ["n3", "n4"]}
+    labels = {0: "Core", 1: "Core"}  # identical, not just case-variant
+    to_wiki(G, communities, tmp_path, community_labels=labels)
+    index_targets = [t for _, t in _inline_links((tmp_path / "index.md").read_text())]
+    assert sorted(index_targets) == ["Core.md", "Core_2.md"], index_targets
+    for t in index_targets:
+        assert (tmp_path / t).exists(), t
+
+
+def test_index_links_same_labelled_god_nodes_to_own_articles(tmp_path):
+    """Same for god nodes: two nodes sharing a label get one article each, and
+    the index must link each row to its own. Resolving by label sends both rows
+    to the first article and leaves `GameState_2.md` unreachable (#3033)."""
+    G = nx.Graph()
+    G.add_node("n1", label="GameState", file_type="code", source_file="a.py", community=0)
+    G.add_node("n2", label="GameState", file_type="code", source_file="b.py", community=0)
+    G.add_node("n3", label="helper", file_type="code", source_file="c.py", community=0)
+    G.add_edge("n1", "n3", relation="calls", confidence="EXTRACTED", weight=1.0)
+    G.add_edge("n2", "n3", relation="calls", confidence="EXTRACTED", weight=1.0)
+    communities = {0: ["n1", "n2", "n3"]}
+    labels = {0: "Only Community"}
+    god_nodes = [
+        {"id": "n1", "label": "GameState", "degree": 1},
+        {"id": "n2", "label": "GameState", "degree": 1},
+    ]
+    to_wiki(G, communities, tmp_path, community_labels=labels, god_nodes_data=god_nodes)
+    index_targets = [t for _, t in _inline_links((tmp_path / "index.md").read_text())]
+    god_targets = [t for t in index_targets if t.startswith("GameState")]
+    assert sorted(god_targets) == ["GameState.md", "GameState_2.md"], index_targets
+    for t in index_targets:
+        assert (tmp_path / t).exists(), t
+
+
+def test_index_links_every_article_written(tmp_path):
+    """Every article `to_wiki` writes must be reachable from the index. This is
+    the general form of #3032/#3033: any row that resolves its target by label
+    rather than by the slug the article was written under leaves a real file
+    with no way in."""
+    G = nx.Graph()
+    G.add_node("n1", label="GameState", file_type="code", source_file="a.py", community=0)
+    G.add_node("n2", label="GameState", file_type="code", source_file="b.py", community=1)
+    G.add_edge("n1", "n2", relation="references", confidence="INFERRED", weight=1.0)
+    communities = {0: ["n1"], 1: ["n2"]}
+    labels = {0: "Core", 1: "Core"}
+    god_nodes = [
+        {"id": "n1", "label": "GameState", "degree": 1},
+        {"id": "n2", "label": "GameState", "degree": 1},
+    ]
+    n = to_wiki(G, communities, tmp_path, community_labels=labels, god_nodes_data=god_nodes)
+    articles = {p.name for p in tmp_path.glob("*.md")} - {"index.md"}
+    assert len(articles) == n == 4, sorted(articles)
+    linked = {t for _, t in _inline_links((tmp_path / "index.md").read_text())}
+    assert articles <= linked, sorted(articles - linked)  # no orphaned article