release: 0.9.80

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

CHANGELOG.md

@@ -2,6 +2,24 @@
 
 Full release notes with details on each version: [GitHub Releases](https://github.com/Graphify-Labs/graphify/releases)
 
+## 0.9.80 (2026-10-07)
+
+More clone-identical determinism, a large MCP retrieval speedup, and a batch of extractor and resolution fixes.
+
+- Fix: more node ids and manifest keys stop leaking the local checkout path or OS username, so a clone keeps producing the same graph — a re-clone no longer keeps a previous checkout's absolute manifest keys (#4175, thanks @SrijanSriv), an AST cache hit whose import target has since been deleted is re-extracted instead of replaying the stale absolute-path id (#4185, #4184, thanks @rohit-jsfreaky), and `--no-cluster` graph.json no longer ships `extract()`'s run-only absolute source paths or undeclared/dangling endpoints (#4189, #4183, thanks @rohit-jsfreaky).
+- Fix: cross-drive scans no longer abort on a syntax-error warning — the remaining unguarded `os.path.relpath` in the partial-extraction warning path falls back to a portable display path on Windows cross-drive files, completing the 0.9.78 #4106 fix (#4149, thanks @xiehuanyi).
+- Fix: an external import stub whose last referencing edge is gone is dropped on incremental rebuild instead of lingering as a zero-degree ghost a fresh build never has (#4181, thanks @rohit-jsfreaky).
+- Fix: **Python** `self.<attr>.<method>()` calls now resolve through the attribute's constructor/annotation type to the owning class, fail-closed on ambiguity (#4176, #2860, thanks @Mpasha17).
+- Fix: **Python** imports under `if TYPE_CHECKING:` are marked type-only so they no longer form impossible runtime import cycles (#4179, #3159, thanks @Yyunozor).
+- Fix: **Java** methods and the calls inside anonymous class bodies (`new Runnable() { public void run() {...} }`) are now captured, mirroring the Kotlin object-literal handling (#4140, thanks @rajatnagda45).
+- Fix: **markdown** links to file names containing spaces or percent-encoding (`[x](<My Note.md>)`, `[x](My%20Note.md)`) resolve to the real file instead of a ghost target; wikilinks stay verbatim and external links stay excluded (#4178, thanks @Yyunozor).
+- Fix: a `re_exports` edge is kept for both files whose ids collide after separator normalization (`a-b/x.ts` and `a/b/x.ts`), removing an order-dependent dropped edge (#4143, thanks @Cintu07).
+- Fix: the Windows `graphify` console script now uses the multi-core extraction pool instead of silently falling back to single-core, since a non-file `__main__.__file__` no longer disables it (#4187, #4186, thanks @rohit-jsfreaky).
+- Perf: the MCP server builds the traversal view and shortest-path graphs once per loaded graph instead of rebuilding them on every call, keyed to the existing graph cache (~1.6x on `query_graph`, up to ~300x on `shortest_path`); the two cached path graphs add a bounded, LRU-capped memory cost (#4192, #4191, thanks @rohit-jsfreaky).
+- Feature: `graph_stats` (CLI and MCP) now reports the graph's build commit and whether it is behind the current HEAD (#4144, thanks @Mpasha17).
+- Chore: raise the `tree-sitter` runtime floor to `>=0.25` so a resolver cannot pair a 0.23/0.24 runtime (ABI 14) with the ABI-15 grammars pinned here and fail every parse (#4148, thanks @JFWaskin).
+- Test: optional-extra tests now skip cleanly when the extra is not installed, so a default `uv sync` no longer reports failures for grammars and SDKs it never pulled (#4193, #4190, thanks @yatharth1706).
+
 ## 0.9.79 (2026-10-06)
 
 - Fix: incremental `graphify update` and `watch` no longer re-cluster and re-render on every run after an unchanged rebuild. The `schema_version`/`graphify_version` metadata added to `graph.json` in 0.9.78 (#4167) was being counted as a topology change by the watch unchanged-topology check, since the freshly-built candidate graph carries no such metadata; it is now excluded from the comparison.

pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "graphifyy"
-version = "0.9.79"
+version = "0.9.80"
 description = "AI coding assistant skill (Claude Code, CodeBuddy, Codex, OpenCode, Kilo Code, Cursor, Gemini CLI, Aider, OpenClaw, Factory Droid, Trae, Hermes, Kiro, Pi, Devin CLI, Google Antigravity) - turn any folder of code, docs, papers, images, or videos into a queryable knowledge graph"
 readme = "README.md"
 license = "Apache-2.0"

uv.lock

@@ -1096,7 +1096,7 @@ wheels = [
 
 [[package]]
 name = "graphifyy"
-version = "0.9.79"
+version = "0.9.80"
 source = { editable = "." }
 dependencies = [
     { name = "networkx", version = "3.4.2", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" },