Fix PreToolUse hook for Claude Code v2.1.117+ (Glob|Grep → Bash matcher)

Grep and Glob tools removed in CC v2.1.117; searches now go through Bash.
Hook now reads stdin tool_input and pattern-matches on search commands.
Uninstall/reinstall handles both old and new matcher for clean upgrades.

Closes #578

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

README.md

@@ -51,6 +51,10 @@ dist/
 
 Same syntax as `.gitignore`. You can keep a single `.graphifyignore` at your repo root — patterns work correctly even when graphify is run on a subfolder.
 
+## What's new in v0.5.2
+
+- **Hook fix for Claude Code v2.1.117+** — the PreToolUse hook now matches on `Bash` instead of `Glob|Grep`. Claude Code v2.1.117 removed dedicated Grep/Glob tools; searches now go through Bash. The hook inspects the command string and only fires on search-like calls (grep, rg, find, fd etc.), so it does not trigger on every shell command.
+
 ## What's new in v0.5.1
 
 - **Node ID collision fix** — files sharing the same name in different directories (e.g. two `utils.py` files) now get unique IDs by prefixing the parent directory name.

graphify/__main__.py

@@ -37,14 +37,22 @@ def _refresh_all_version_stamps() -> None:
             vf.write_text(__version__, encoding="utf-8")
 
 _SETTINGS_HOOK = {
-    "matcher": "Glob|Grep",
+    # Claude Code v2.1.117+ removed dedicated Grep/Glob tools; searches now go through Bash.
+    # We match on Bash and inspect the command string to avoid firing on every shell call.
+    "matcher": "Bash",
     "hooks": [
         {
             "type": "command",
             "command": (
-                "[ -f graphify-out/graph.json ] && "
-                r"""echo '{"hookSpecificOutput":{"hookEventName":"PreToolUse","additionalContext":"graphify: Knowledge graph exists. Read graphify-out/GRAPH_REPORT.md for god nodes and community structure before searching raw files."}}' """
-                "|| true"
+                "CMD=$(python3 -c \""
+                "import json,sys; d=json.load(sys.stdin); "
+                "print(d.get('tool_input',d).get('command',''))\" 2>/dev/null || true); "
+                "case \"$CMD\" in "
+                "*grep*|*rg\ *|*ripgrep*|*find\ *|*fd\ *|*ack\ *|*ag\ *) "
+                "  [ -f graphify-out/graph.json ] && "
+                r"""  echo '{"hookSpecificOutput":{"hookEventName":"PreToolUse","additionalContext":"graphify: Knowledge graph exists. Read graphify-out/GRAPH_REPORT.md for god nodes and community structure before searching raw files."}}' """
+                "  || true ;; "
+                "esac"
             ),
         }
     ],
@@ -857,7 +865,7 @@ def _install_claude_hook(project_dir: Path) -> None:
     hooks = settings.setdefault("hooks", {})
     pre_tool = hooks.setdefault("PreToolUse", [])
 
-    hooks["PreToolUse"] = [h for h in pre_tool if not (h.get("matcher") == "Glob|Grep" and "graphify" in str(h))]
+    hooks["PreToolUse"] = [h for h in pre_tool if not (h.get("matcher") in ("Glob|Grep", "Bash") and "graphify" in str(h))]
     hooks["PreToolUse"].append(_SETTINGS_HOOK)
     settings_path.write_text(json.dumps(settings, indent=2), encoding="utf-8")
     print(f"  .claude/settings.json  ->  PreToolUse hook registered")
@@ -873,7 +881,7 @@ def _uninstall_claude_hook(project_dir: Path) -> None:
     except json.JSONDecodeError:
         return
     pre_tool = settings.get("hooks", {}).get("PreToolUse", [])
-    filtered = [h for h in pre_tool if not (h.get("matcher") == "Glob|Grep" and "graphify" in str(h))]
+    filtered = [h for h in pre_tool if not (h.get("matcher") in ("Glob|Grep", "Bash") and "graphify" in str(h))]
     if len(filtered) == len(pre_tool):
         return
     settings["hooks"]["PreToolUse"] = filtered

pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "graphifyy"
-version = "0.5.1"
+version = "0.5.2"
 description = "AI coding assistant skill (Claude Code, Codex, OpenCode, Cursor, Gemini CLI, Aider, OpenClaw, Factory Droid, Trae, Hermes, Kiro, Google Antigravity) - turn any folder of code, docs, papers, images, or videos into a queryable knowledge graph"
 readme = "README.md"
 license = { file = "LICENSE" }

tests/test_claude_md.py

@@ -109,7 +109,7 @@ def test_install_creates_settings_json(tmp_path):
     assert settings_path.exists()
     settings = json.loads(settings_path.read_text())
     hooks = settings.get("hooks", {}).get("PreToolUse", [])
-    assert any("Glob|Grep" in h.get("matcher", "") for h in hooks)
+    assert any(h.get("matcher") == "Bash" for h in hooks)
 
 
 def test_install_settings_json_idempotent(tmp_path):
@@ -120,8 +120,8 @@ def test_install_settings_json_idempotent(tmp_path):
     settings_path = tmp_path / ".claude" / "settings.json"
     settings = json.loads(settings_path.read_text())
     hooks = settings.get("hooks", {}).get("PreToolUse", [])
-    glob_grep_hooks = [h for h in hooks if "Glob|Grep" in h.get("matcher", "")]
-    assert len(glob_grep_hooks) == 1
+    bash_hooks = [h for h in hooks if h.get("matcher") == "Bash" and "graphify" in str(h)]
+    assert len(bash_hooks) == 1
 
 
 def test_uninstall_removes_settings_hook(tmp_path):
@@ -133,4 +133,4 @@ def test_uninstall_removes_settings_hook(tmp_path):
     if settings_path.exists():
         settings = json.loads(settings_path.read_text())
         hooks = settings.get("hooks", {}).get("PreToolUse", [])
-        assert not any("Glob|Grep" in h.get("matcher", "") for h in hooks)
+        assert not any(h.get("matcher") == "Bash" and "graphify" in str(h) for h in hooks)