safishamsiandClaude Opus 4.8 97656fae2d fix(build,watch): tier-aware merge so re-extract keeps the other layer (#2333, #2334, #2336) ...

Node/edge ownership was keyed on source_file alone, but each file has an AST
tier and a semantic tier. A semantic-only re-extract deleted a doc's AST
headings, and a full _rebuild_code deleted document AST nodes. Add an
_is_ast_tier() predicate (with a source_location legacy fallback for the
unreliable _origin marker, #2334), backfill _origin on load so graphs
self-heal, make build_merge / merge_raw_extraction replace by (source_file,
tier) instead of source_file (coexist policy: an AST re-extract replaces only
AST nodes and keeps the semantic layer, and vice versa), and scope the
full-rebuild AST drop to sources actually regenerated (#2336) so a
semantic-backed doc keeps its AST layer. Deletion prune stays tier-blind.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

2026-08-01 12:21:04 +01:00

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fixtures

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__init__.py

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bench_extract.py

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bench_query_scoring.py

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conftest.py

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test_affected_cli.py

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test_affected_member_seed.py

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test_agents_platform.py

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test_analyze.py

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test_anthropic_custom_endpoint.py

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test_antigravity_install.py

fix(install): stop hardcoding the global skill path in the Antigravity workflow (#2319)

2026-07-30 17:13:48 +01:00

test_astro_extraction.py

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test_astro_import_ids.py

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test_atomic_writes.py

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test_backend_extras.py

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test_benchmark_raw_graph.py

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test_benchmark.py

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test_build_merge_hyperedges_and_prune.py

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test_build.py

fix(build,watch): tier-aware merge so re-extract keeps the other layer (#2333, #2334, #2336)

2026-08-01 12:21:04 +01:00

test_builtin_global_type_refs.py

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test_cache.py

fix(cache): re-anchor cached ids so a warm hit can't replay another root (#2257)

2026-07-29 17:00:15 +01:00

test_callflow_html.py

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test_cargo_introspect.py

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test_case_sensitive_resolution.py

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test_charmap_encoding.py

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test_chunking.py

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test_cjs_module_extension.py

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test_claude_cli_backend.py

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test_claude_md.py

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test_cli_broken_pipe.py

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test_cli_export.py

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test_cluster.py

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test_codebuddy.py

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test_community_hub_labels.py

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test_confidence.py

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test_corrupt_graph_json.py

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test_cpp_objc_cross_file_calls.py

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test_cpp_preprocess.py

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test_cross_extension_reexport_self_cycle.py

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test_cross_language_call_resolution.py

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test_csharp_member_calls.py

fix(csharp): per-method receiver typing so cross-method name reuse stops dropping true calls edges (#2299)

2026-07-30 18:38:58 +01:00

test_csharp_type_resolution.py

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test_dart.py

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test_dedup.py

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test_detect.py

fix(detect): prune only configured output path

2026-08-01 11:36:30 +01:00

test_devin.py

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test_dotnet.py

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test_evidence_binding.py

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test_explain_cli.py

fix: explain no longer resolves an ambiguous name to an arbitrary file

2026-07-30 17:13:48 +01:00

test_export.py

fix(export)+test: all-dots Obsidian label falls back to unnamed; .env.example regression test (#2205, #2184)

2026-07-28 10:18:01 +01:00

test_extract_cache_location.py

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test_extract_cli.py

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test_extract_code_only_cli.py

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test_extract.py

fix(extract): close the absolute-path node-id leak class (#2231, #2243)

2026-07-28 10:18:01 +01:00

test_extraction_spec_ids.py

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test_extractors_registry.py

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test_falkordb_integration.py

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test_file_label_disambiguation.py

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test_file_node_id_spec.py

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test_file_slice.py

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test_gemini_hook.py

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test_global_graph.py

fix: preserve edge direction in merge-graphs

2026-07-29 17:02:00 +01:00

test_go_builtin_call_targets.py

fix(go): scope the predeclared-function filter to Go bare identifiers

2026-07-30 17:13:48 +01:00

test_god_nodes_cli.py

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test_google_workspace.py

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test_home_sandbox.py

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test_hook_guard.py

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test_hook_strict.py

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test_hooks.py

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test_hypergraph.py

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test_id_normalization_contract.py

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test_image_vision.py

fix(llm): correct bedrock max_attempts semantics + stub botocore.config in the reasoning test (follow-up to #2283/#2288)

2026-07-29 17:25:08 +01:00

test_import_extension_resolution.py

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test_import_self_loops.py

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test_incomplete_build_guard.py

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test_incremental.py

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test_indirect_call_nested_closure_shadow.py

fix(extract): shadow untracked JS/TS closure params from indirect_call args (#2241)

2026-07-28 09:37:39 +01:00

test_indirect_dispatch_assign_return.py

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test_indirect_dispatch_getattr.py

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test_indirect_dispatch.py

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test_ingest.py

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test_install_references.py

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test_install_roundtrip.py

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test_install_strings.py

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test_install_upgrade.py

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test_install.py

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test_java_member_calls.py

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test_java_type_resolution.py

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test_js_exported_scalar_bindings.py

fix(extract): emit nodes for exported scalar bindings

2026-07-30 17:13:48 +01:00

test_js_import_resolution.py

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test_jsconfig_baseurl.py

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test_label_retry.py

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test_labeling.py

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test_language_resolvers.py

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test_languages.py

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test_llm_backends.py

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test_llm_parser.py

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test_long_path_hashing.py

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test_manifest_ingest.py

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test_mcp_ingest.py

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test_merge_chunks_validation.py

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test_merge_graphs_cli.py

fix: preserve edge direction in merge-graphs

2026-07-29 17:02:00 +01:00

test_minhash.py

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test_multigraph_compat.py

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test_multigraph_diagnostics.py

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test_multilang.py

fix(sql): sourceless stubs + identifier normalization for cross-file table references (#2324)

2026-07-30 18:38:58 +01:00

test_node_id_canonical.py

fix(extract): parse .tsx with the TSX grammar so symbol-resolution stops leaking absolute-slug ids (#2262)

2026-07-29 17:25:08 +01:00

test_non_string_node_ids.py

fix(build): coerce non-string node ids so a numeric id cannot abort the build

2026-08-01 11:36:30 +01:00

test_obsidian_dangling_member.py

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test_obsidian_filename_cap.py

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test_office_incremental.py

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test_office_limits.py

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test_ollama_retry_cap.py

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test_ollama.py

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test_openai_custom_endpoint.py

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test_partial_cache.py

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test_pascal_call_scoping.py

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test_pascal_resolution.py

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test_pascal.py

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test_path_cli.py

fix(cli): recover edge direction from _src/_tgt in path and explain (#2309)

2026-07-30 18:38:58 +01:00

test_paths.py

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test_pg_introspect.py

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test_phantom_cross_package_call.py

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test_phantom_external_import.py

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test_php_type_resolution.py

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test_pipeline.py

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test_provider_registry.py

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test_prs.py

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test_python_decorators.py

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test_python_import_resolution.py

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test_query_cli.py

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test_query_induced_edges.py

fix(query): render every edge between visited nodes, not just traversal edges

2026-08-01 11:36:30 +01:00

test_querylog.py

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test_rationale.py

fix(extract): normalize whitespace before truncating rationale labels (#2206)

2026-07-28 09:37:39 +01:00

test_read_hook.py

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test_reflect.py

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test_replace_or_append_section.py

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test_report.py

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test_ruby_resolution.py

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test_scala_self_type.py

fix(scala): dispatch self-type annotations to requires edges (#2052)

2026-07-28 09:37:39 +01:00

test_scip_ingest.py

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test_search_hook.py

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test_security.py

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test_semantic_cache_out_root.py

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test_semantic_cleanup.py

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test_semantic_fragment_sanitize.py

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test_semantic_id_remap_root.py

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test_semantic_similarity.py

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test_serve_http.py

fix(serve): bound multi-project graph contexts (#2268)

2026-07-29 17:02:00 +01:00

test_serve.py

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test_settings_merge.py

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test_skill_version_warning.py

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test_skillgen.py

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test_src_layout_import_resolution.py

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test_stale_prune.py

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test_stat_index_portability.py

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test_swift_builtin_noise.py

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test_swift_computed_properties.py

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test_swift_cross_file_calls.py

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test_swift_import_resolution.py

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test_symbol_resolution.py

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test_terraform.py

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test_transcribe.py

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test_ts_decorators.py

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test_ts_generators.py

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test_ts_import_require.py

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test_ts_inheritance.py

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test_ts_namespace.py

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test_ts_receiver_member_calls.py

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test_typescript_module_extensions.py

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test_uninstall_scope.py

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test_validate.py

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test_vue_extraction.py

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test_watch_manifest_location.py

test(watch): cover manifest location, anchor and commit provenance (#2316)

2026-08-01 11:36:30 +01:00

test_watch.py

fix(build,watch): tier-aware merge so re-extract keeps the other layer (#2333, #2334, #2336)

2026-08-01 12:21:04 +01:00

test_wheel_packaging.py

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test_wiki.py

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test_word_count_cache.py

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test_zero_node_no_cache.py

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