Safi f146be3ea2 fix: numpy Python 3.13 pin + codex skill dir (#1154 #1160) ...

#1154: scope numpy>=2.0 constraint to python_version>='3.13' only.
numpy 1.26.4 ships no cp313 wheel so uv sync falls back to a source
build requiring a C compiler. The marker avoids forcing numpy 2.x on
3.10-3.12 users who have working 1.x environments.

#1160: codex platform skill now installs to .codex/skills/graphify/
instead of .agents/skills/graphify/. The hook already wrote to .codex/
so the skill destination was inconsistent. Propagates automatically
through install/uninstall (both read _PLATFORM_CONFIG dynamically).
Updated all codex-specific test assertions.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

2026-06-07 12:11:34 +01:00

..

fixtures

feat/fix: land PRs #1118 #1110 #1159 #1107 #1103 (graph quality + new features)

2026-06-07 01:20:38 +01:00

__init__.py

…

bench_extract.py

…

conftest.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_affected_cli.py

feat: add v8 affected and import-resolution support

2026-05-22 13:24:54 +01:00

test_analyze.py

feat: detect circular import dependencies at file level (#961)

2026-05-30 21:37:47 +01:00

test_antigravity_install.py

write antigravity rules and workflows on project-scoped install

2026-06-02 23:48:54 +01:00

test_astro_extraction.py

…

test_backend_extras.py

add anthropic extra and fix backend-missing hints for uv tool installs

2026-06-03 00:08:03 +01:00

test_benchmark.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_build.py

fix calls edge direction flipping on bidirectional pairs in undirected build (#1061)

2026-05-28 17:40:04 +01:00

test_cache.py

fix: relativize manifest, .graphify_root, and cache source_file fields (#777)

2026-06-03 21:03:06 +01:00

test_callflow_html.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_charmap_encoding.py

…

test_chunking.py

…

test_claude_cli_backend.py

honour GRAPHIFY_API_TIMEOUT in claude-cli and Anthropic SDK backends (#1112)

2026-06-05 10:45:01 +01:00

test_claude_md.py

…

test_cli_export.py

fix(cli): apply remap_communities_to_previous in cluster-only path (#1028)

2026-05-26 20:12:02 +01:00

test_cluster.py

…

test_confidence.py

…

test_cpp_preprocess.py

harden ollama metadata egress and cpp path handling (F3, F5)

2026-06-02 22:23:15 +01:00

test_dart.py

feat(dart): modernize AST parser, support nested generics and part-of redirection (#1098)

2026-06-01 16:13:36 +01:00

test_dedup.py

…

test_detect.py

fix: relativize manifest, .graphify_root, and cache source_file fields (#777)

2026-06-03 21:03:06 +01:00

test_devin.py

feat: add Devin CLI support (graphify devin install/uninstall) (#1020)

2026-05-26 09:17:18 +01:00

test_dotnet.py

add .NET project file support (.sln, .csproj, .fsproj, .vbproj, .razor, .cshtml)

2026-05-26 12:27:28 +01:00

test_explain_cli.py

…

test_export.py

Rate-limit backup_if_protected to one folder per day via content hash

2026-05-25 09:14:20 +01:00

test_extract_cli.py

fix(extract): don't require LLM API key for code-only corpus (#1122)

2026-06-05 22:28:57 +01:00

test_extract.py

fix(extract_dart): use _file_stem instead of str(path) for child node IDs to prevent machine-specific absolute paths in graph.json (#999)

2026-05-26 20:21:27 +01:00

test_file_node_id_spec.py

relativize symbol node IDs for root-level files to match spec (fixes #1096)

2026-05-31 17:09:30 +01:00

test_global_graph.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_google_workspace.py

…

test_hooks.py

harden hook interpreter detection against injection and unquoted exec

2026-06-03 15:40:06 +01:00

test_hypergraph.py

…

test_image_vision.py

feat/fix: land PRs #1118 #1110 #1159 #1107 #1103 (graph quality + new features)

2026-06-07 01:20:38 +01:00

test_import_extension_resolution.py

…

test_incremental.py

make incremental extract tests deterministic under a real LLM env key

2026-06-03 00:20:39 +01:00

test_ingest.py

…

test_install_references.py

add end-to-end test that gemini install leaves no dead reference pointer

2026-06-02 22:50:33 +01:00

test_install_roundtrip.py

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

2026-06-02 20:48:13 +01:00

test_install_strings.py

close the Read-tool graph bypass with a Read/Glob PreToolUse hook

2026-06-03 00:00:33 +01:00

test_install_upgrade.py

fix(install): route kiro install/uninstall through shared progressive helper (#1142)

2026-06-05 22:15:09 +01:00

test_install.py

fix: numpy Python 3.13 pin + codex skill dir (#1154 #1160)

2026-06-07 12:11:34 +01:00

test_js_import_resolution.py

match AST file-level node IDs to the skill.md spec (fixes #1033)

2026-05-31 12:23:56 +01:00

test_labeling.py

fold community labeling into llm.py instead of a standalone module

2026-05-31 23:37:28 +01:00

test_languages.py

feat/fix: land PRs #1118 #1110 #1159 #1107 #1103 (graph quality + new features)

2026-06-07 01:20:38 +01:00

test_llm_backends.py

feat/fix: land PRs #1118 #1110 #1159 #1107 #1103 (graph quality + new features)

2026-06-07 01:20:38 +01:00

test_llm_parser.py

fix(claude-cli): eliminate hollow-response loop from system-prompt conflict

2026-05-28 17:44:35 +02:00

test_mcp_ingest.py

feat: MCP config extractor (.mcp.json, claude_desktop_config.json, mcp.json)

2026-05-26 20:16:41 +01:00

test_multigraph_compat.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_multigraph_diagnostics.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_multilang.py

feat: semantic type-reference edges for Swift, Kotlin, PHP, Rust, and Go (#1015)

2026-05-28 14:46:03 +01:00

test_obsidian_filename_cap.py

cap obsidian/canvas filenames to avoid ENAMETOOLONG on long labels (fixes #1094)

2026-05-31 16:41:18 +01:00

test_office_limits.py

tighten F2 and F3 from review: bounded decompression, ollama DNS + clean error

2026-06-02 22:50:33 +01:00

test_ollama.py

tighten F2 and F3 from review: bounded decompression, ollama DNS + clean error

2026-06-02 22:50:33 +01:00

test_pascal.py

…

test_path_cli.py

…

test_pg_introspect.py

feat/fix: land PRs #1118 #1110 #1159 #1107 #1103 (graph quality + new features)

2026-06-07 01:20:38 +01:00

test_pipeline.py

…

test_provider_registry.py

validate custom-provider base_url and gate project-local providers (F1)

2026-06-02 22:16:58 +01:00

test_prs.py

…

test_python_import_resolution.py

feat: add cross-language semantic contexts for Python, JS/TS, C#, and Java (#996)

2026-05-24 20:38:10 +01:00

test_query_cli.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_querylog.py

add query logging to ~/.cache/graphify-queries.log (#1128)

2026-06-03 21:04:01 +01:00

test_rationale.py

fix: memory-dir gitignore leak, Pass 2 dedup cross-file identical merge, decorated method node ID mismatch (#1047, #1046, #1050)

2026-05-27 22:30:08 +01:00

test_read_hook.py

close the Read-tool graph bypass with a Read/Glob PreToolUse hook

2026-06-03 00:00:33 +01:00

test_report.py

…

test_scip_ingest.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_security.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_semantic_cleanup.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_semantic_similarity.py

…

test_serve_http.py

feat(serve): add Streamable HTTP transport to MCP server (#1143)

2026-06-07 00:43:40 +01:00

test_serve.py

fix: OpenCode project path, hook loop guard, deterministic output, Amp platform, punctuation search, builtin god-node filter, .svh Verilog (#1040, #1018, #1037, #948, #994, #916, #1042)

2026-05-27 12:39:22 +01:00

test_skillgen.py

harden _always_on against missing blocks and pin skillgen baselines

2026-06-02 21:08:11 +01:00

test_symbol_resolution.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

test_terraform.py

revert: remove importorskip now that uv.lock includes tree-sitter-hcl

2026-06-05 21:46:25 +01:00

test_transcribe.py

…

test_ts_inheritance.py

capture TS interface-extends and same-file class heritage (fixes #1095)

2026-05-31 16:47:52 +01:00

test_validate.py

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test_watch.py

feat/fix: land PRs #1118 #1110 #1159 #1107 #1103 (graph quality + new features)

2026-06-07 01:20:38 +01:00

test_wheel_packaging.py

harden _always_on against missing blocks and pin skillgen baselines

2026-06-02 21:08:11 +01:00

test_wiki.py

Fix wiki TypeError on null source_file and skip nested worktrees/ dirs (#1016, #1023)

2026-05-26 09:06:43 +01:00